Magallana gigas (Pacific oyster): 105348069
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Entry
105348069 CDS
T03920
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105348069
Transcription factors [BR:
crg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105348069
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
105348069
NCBI-ProteinID:
XP_011455662
UniProt:
K1Q7N0
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Position
8:31182862..31184918
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AA seq
327 aa
AA seq
DB search
MEYQDLPEQDLPKPGQTQLPPSSQGMHVPVNPQHAGMHGSHSHGQPQQHSPNPQTNLNGS
GAGSPNSGASKKDADRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSE
AEKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKTLMKKDKYALPGMPSGAPLQPGREGQM
YPMGGYMPNGYPMMHDANAYMNQMGLAGQYGYMPSQQMPGNQMTSGSYMNGSSSYTMSMA
GMGPYPSMSPSQMTGGVKREPTPGSGPQGPGRPTNPGDLREMISMYLPTGDGSDPHSAQQ
RLMHQAHYQPPPPSSEGVNNTVPLTHM
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcaggaccttcccgaacaggacttaccaaagcccggacaaacacagctaccc
ccatcttctcaaggaatgcacgtgccggtcaaccctcagcacgcggggatgcatggctcc
cattctcacggccagccccagcaacactcaccgaatccccaaaccaacctcaatggcagc
ggagcagggtccccgaattctggggccagcaaaaaagacgcagacagagtgaagcgccct
atgaacgccttcatggtgtggtctcgcggccagagacggaaaatggcccaggagaacccg
aaaatgcataattcagagataagtaaaagactcggtgctgagtggaaattattatccgaa
gccgaaaaacggccatttatcgacgaggccaaaagactccgtgccatacacatgaaggaa
catcccgattacaaatacaggccaaggaggaaaacgaaaacactcatgaagaaagataag
tacgccctacccggaatgccatccggagcccctctacagcccgggcgggagggacagatg
taccccatgggaggatacatgcccaacgggtaccctatgatgcacgacgcaaacgcatac
atgaatcaaatgggccttgccggacagtacggctacatgccatcacaacaaatgcccggg
aaccagatgacgtcgggatcctacatgaacggaagctccagctacaccatgtccatggcc
gggatgggcccttacccctcaatgtctccctcgcagatgactggtggcgtcaaacgagag
cccacccccggatccggtccccagggccccgggcgacccaccaaccccggagatttacgt
gaaatgatcagtatgtacctacccacaggcgacggctctgacccccatagtgctcagcag
agactcatgcatcaagctcactaccaaccccctccaccctcctcagaaggggtaaacaat
actgtaccgcttacgcatatgtaa
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integrated database retrieval system
