Magallana gigas (Pacific oyster): 105348460
Help
Entry
105348460 CDS
T03920
Name
(RefSeq) LIM/homeobox protein Lhx3 isoform X1
KO
K09374
LIM homeobox protein 3/4
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105348460
Transcription factors [BR:
crg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
105348460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
C1_1
Motif
Other DBs
NCBI-GeneID:
105348460
NCBI-ProteinID:
XP_011456185
UniProt:
A0A8W8LHX8
LinkDB
All DBs
Position
2:59819350..59847603
Genome browser
AA seq
397 aa
AA seq
DB search
MNMSSLSDLPPAHGGYHTEGSRASPTPASLTEMISRNKFLEAAIPKCAGCGEPILDRFIL
KVLDRSWHSRCLQCHDCHARLSDKCFSKGEKVFCKDDFFRRYGTKCAGCEKGIPPTEVVR
RAQDNVYHLECFACLMCSRQLNTGDEFYLMEDRKLVCKADYESAKARGINEYDIDAANKR
PRTTITAKQLEALKRAYNESPKPARHVREQLSAETGLDMRVVQVWFQNRRAKEKRLKKDA
GRNRWSPYFRQLKRNGDQDSSNSADDRSDICLDDDEVDDLDESISQSGRLSGDLFSSGSG
QPMDREPNMGSVPVGPPESPSMETWSHFGNVPSNPNFLGRHSPNIPMTNSHLMPMDPLPM
MGGPSSVARLMGGDLNDNSQGYSEYSSNSNHNHVEVY
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgtcctccctgagtgacttaccccctgcccatggtggttaccacacggagggg
tcacgggctagccccactccagcctccctgaccgaaatgatcagtcggaacaagttcctg
gaagccgccatccctaagtgcgcggggtgcggggaaccgattctggaccgattcatcctg
aaagtcctagatagatcctggcactcccgctgtctccagtgtcatgactgccacgcccgg
ctcagcgacaagtgcttctccaagggggagaaggtcttctgcaaggacgacttctttaga
cgctatggtactaagtgtgctggctgtgagaaggggattcccccgactgaggtggtgcgc
cgcgcccaagacaatgtgtaccacctggaatgtttcgcctgcctgatgtgtagcagacag
ctcaacacgggcgacgagttctacctcatggaagaccggaagttggtctgtaaggcggac
tacgagtcggctaaagcccggggcatcaatgagtacgatatagatgcagcgaataaaaga
ccacgcacaactataactgcaaaacagctagaagccctgaaacgggcgtacaacgagagc
ccaaaaccagctcgacacgtgagggaacaactgagtgcggaaaccggcttggacatgcgt
gttgttcaggtctggtttcaaaatcggcgcgccaaagagaagcgactcaagaaagacgcc
ggaagaaacagatggagcccttacttccggcaactaaaacgcaacggtgaccaggatagt
tctaacagtgcagacgacagatcggacatctgtcttgatgacgatgaagtagacgacttg
gacgaatcaatcagccagtctggtcgattgtcaggagatttatttagttcgggttcagga
caaccaatggacagagagccaaacatgggcagtgtgcccgtcggtccccctgaatccccg
tccatggaaacctggtcccactttggaaacgttccaagtaatccgaatttcctcggacgt
cattcgcccaacattcccatgacaaactcacatttaatgcctatggatccactgcccatg
atgggcggcccgtccagtgtagctaggctgatgggaggtgatttgaacgataactcacaa
ggttattccgagtactcatcaaattcaaaccataatcacgtggaagtttactaa
DBGET
integrated database retrieval system
