Magallana gigas (Pacific oyster): 105348555
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Entry
105348555 CDS
T03920
Name
(RefSeq) transcription factor HES-4-A
KO
K06054
hairy and enhancer of split 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03460
Fanconi anemia pathway
crg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105348555
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105348555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105348555
03400 DNA repair and recombination proteins [BR:
crg03400
]
105348555
Transcription factors [BR:
crg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
105348555
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
105348555
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Phage_connector
CXCL16
UBN_AB
Motif
Other DBs
NCBI-GeneID:
105348555
NCBI-ProteinID:
XP_011456334
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Position
3:complement(7355138..7356953)
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AA seq
321 aa
AA seq
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MMSVDTLDNVMSKEHKTSLRKSNKPIMEKRRRARINNCLTQLKSLVLESMRKDSSQYSKL
EKADILEMTVKHLRNLQRNQLASAMASDPTVVTKFRAGFHECANEVIRYLGTVQNVGSDV
KSRLVSHLSTCLQTQNNTASTENMHTPCQPQQQVPVTSPQQQVNILQPLSVHIPHNANVA
SRPQSSEFAFSRQTSPQSLSQSPQLLNIATPVSSDSNSNSPIKSTPISGQFQIIPSNLYN
GPVAVYVGQINQRQCMTTPDSMPVFTLQVPANNTSPSYQCRSPQEFPQQQKSKPLAQQHR
SAFVECKQGVPESPESLWRPW
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgttgatacactggataacgtgatgtccaaggaacacaaaacttcgttgaga
aagagcaataagcccatcatggaaaagagaagaagagcaagaatcaataattgtttaact
cagctgaaatcattggtcttggagtcaatgcgaaaagacagttctcagtactcaaagttg
gagaaagctgacatattggagatgactgtgaaacatcttcgcaatctccagaggaaccaa
ctagcatcagcaatggcgtcagatcctacagttgtcacaaagttccgagccggattccac
gagtgtgctaatgaagttattcgttacctaggaaccgtgcagaacgtcgggtccgatgtg
aagtcacgtctcgtgtcccatctctccacgtgtctccagacacagaacaacacagcgtcc
acagaaaacatgcacacgccatgtcaaccccagcaacaggtgcccgtgacgtcaccacaa
caacaagttaacattttacagccactcagtgttcatattccgcacaacgccaatgtcgcc
tcccgtccccagtcttccgagttcgcattcagtcgccagacctcgccacagtctttgtcc
cagtccccccagttactgaacattgctacccccgtgtcctcagactctaatagtaactct
cccatcaaatccactccgatatcgggacaatttcaaatcattcccagcaatctgtacaat
ggtccggtggctgtgtatgtggggcagattaaccagagacagtgtatgaccaccccagac
tccatgccagtgttcacgttacaagttcccgccaataacacctccccgtcttaccaatgc
aggtctcctcaagaattccctcagcaacagaaatccaaaccattagctcagcaacataga
agtgcctttgttgaatgtaagcaaggcgttcccgagtctcctgagagtctctggagaccc
tggtga
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integrated database retrieval system