Magallana gigas (Pacific oyster): 105348556
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Entry
105348556 CDS
T03920
Name
(RefSeq) transcription factor HES-1-B
KO
K06054
hairy and enhancer of split 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03460
Fanconi anemia pathway
crg04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105348556
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105348556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
105348556
03400 DNA repair and recombination proteins [BR:
crg03400
]
105348556
Transcription factors [BR:
crg03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
105348556
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
105348556
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Motif
Other DBs
NCBI-GeneID:
105348556
NCBI-ProteinID:
XP_011456335
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Position
3:complement(7371171..7372660)
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AA seq
286 aa
AA seq
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MCNTYQSNTQSNNMEDYEQENRNFPEDKILSRKSKKPLMEKRRRARINNCLVQLKSLVLQ
AMKKDTTHYSKLEKADILEMTVKYLRSLQRRQMTSAVAADPTVAAKYSMGFTECASEVAR
YLGNSQGINDEVRGRLLGHLSNCVQTGNSSPQVGGGQTYGQPLHVQIPRVQSDLSRVHSE
GLLSQPPAGFLSNSTSSSGLQVTGSFQIVPDNLYSEHLPVFFRQSQAMLDSVSNRNSSLP
KPSPYSPPTCDMSRDIFQSTRKGLVPSPPVASAAMTLKEERLWRPW
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaatacataccaaagtaatacacaaagtaataatatggaggattacgaacaagaa
aatcgaaactttccagaggataaaatcctttccagaaagagtaaaaagccattgatggag
aagagaagaagagcccgaattaataattgtcttgttcaactgaaaagccttgttctacaa
gccatgaaaaaagatacgacacattattccaagctggagaaggcagacattctagagatg
actgtcaaatatctgcgcagtctacagagacgacagatgacgtcagccgtcgccgctgac
cccacggtcgccgccaaatactccatgggcttcactgaatgtgcctccgaagtggccaga
tatcttggaaattctcagggaataaacgacgaagttcgtgggcgactcttaggtcatctg
tccaactgtgtccagacagggaattcttcaccgcaagtgggaggcgggcagacctacgga
caaccattgcacgtacagattccacgagtccagagcgacctgtcacgtgttcactcagaa
ggactcctgtcccagccaccggcggggttcttatcaaactctacatcttcatccgggtta
caggtgaccgggtccttccagatagttcccgacaacctctacagtgaacatttaccggtg
tttttccgacaatcacaggccatgctggactctgtctctaacaggaactcgtccctcccc
aaaccctcgccttactccccacccacctgtgatatgtcacgtgacattttccagtccacc
aggaagggactggttcccagcccgcccgtggcttccgcagccatgaccttgaaagaagag
cgcttgtggcgaccttggtga
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