KEGG   Magallana gigas (Pacific oyster): 105348700
Entry
105348700         CDS       T03920                                 
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
crg  Magallana gigas (Pacific oyster)
Pathway
crg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:crg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105348700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crg03400]
    105348700
DNA repair and recombination proteins [BR:crg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     105348700
SSDB
Motif
Pfam: VIT PARP HSP70 VWA_3 VWA VIT_2 BRCT_2 VWA_2 BRCT PTCB-BRCT PARP_reg
Other DBs
NCBI-GeneID: 105348700
NCBI-ProteinID: XP_065927970
LinkDB
Position
9:complement(40782228..40822270)
AA seq 2005 aa
MAGVLAGCQIVLDLSTSVGFKKKREVRSTITQNGGVISYIVTKKRTHVVLNDAEKADVSY
KCKMAAKFCIPVVSLDFIFDCISQGKLLDTDNYLLVGKTKAREFSSGKISAEKSELKPKG
KNRKTFFTFNPKSVKAWKEKDKNMPPFDDESDVAKFAMFQIGDKKTHTTQFGVLEICAFR
GVTALENKDATPRFCVCSHRGSVEDLQNKAECGSKEFRFVQTSEEALCVYSALYKQMKDP
PSGMNVCHKPPCQNIGTKQLQKLILEYGMEETELSAPVAELTQHIWREAGGEIEQVLSSP
LQSIKLDQVEKATAILTQMKESQSDNSKLQALFDEFYTALPHRPQYRTTSFSMSWLARKL
DLCQLIKDVVSVSEATNWSTRGNAEAQYKALRCQISHVSGGLPRQVLDILNLKQGEEMRI
QNVYAIHRPSESENFRSDLSSRLLFHASNAENFVGILSRGLLMPKVVVDDYGGKRTDPGM
LGHGIYFASSASTSIKYSKPSKTRNTRMMLVSQVALGTTLDVYKHQWDLTEPPSGYHSVH
GVAATEGVESDFQDDEFVVYNTDQQMLSYLVEFTIGSEIPVEISVEKEVLEREETPEETI
IDISDVHDVTNPLTKVKAGLVSNDNTPVTLLEAHIRAKVIDLAGEVVVLQEYHNNSDQAL
EAKYVFPLDEMAAVCGFEAFINGKHIVGEVKEKETAHREYKRAVQEGHGAYLMDQDKETP
EVFTVSVGNLPTGAVVVIKITYVTELQVDGDLINFRLPGSVAPWKQKFVDAPEFKDKDWD
TVQVGNTCCSVQVYVDMPFDIRSLECPTHKVLSKRTATKAVVQMKDNQMLEDGFQLLIGL
AEIHVPRMWVESDEGGSQACMLTFYPEFEADEESEVEVILMIDSSNSMKDSSHRDAKKAA
LLVLHLMDPTWRFNVVSFGTAFRELFPSSLPANKFNVQTARQHIQKLQANQGNTELCRPL
HSYYLLKSESSTRNIFLFSDGYINNDEDTLVKISQNSQHTRVFTIGISSVANRHLLKAIA
RVGAGSNEFYDSKFKSKWEDKVRSQLQKAAQPVLTSVSVDWRHDDQHPAPIQAPQQITAL
FNGSRQVVYGFVDNCYMATLKAKIGVQEISTIVSTSDLSVTKGKMLHRLTAKGVIRDWED
GVLSPDRTGHEVKKMNLKQYVIELSKRYSIVTSLTSFVAIEKREKDEVVSDSAPVIKDLL
TKEDVDVLTYLSWDNEDEAVPDSSPAMGGVDMLYNNFYASSDNEELEELKSTNSEEKFLR
EERGTSSSEEEEEEEEEILEENGKKGRSRKFLSRMRSCRIPVQATVPMATMASEVSFQAS
PDKIIADFNVYEDLAKQDVMHEELDPSAKAKYRIKMGGLGYKGDIVSQGQKDTCVESEVT
GSKPRVGKDIDESTGSPTFYGSAKGFKESTLKIMRKRLVSGGFFCRRSTGVISVNIDQTC
SLPPTLDPKPPPTLDPTPTPTLDSMPQPPVLAPKPIPPALEVEPNFYNSLSNRSQTVLSK
QARIPALPSMEASRSSDELQPWLKSTQPVSWRSCPLPLRRPSKKRVLSPPSDPFVSIYDE
SEPLLGEENDMNVDITLQGKLLPSEEGEKSTRGPVVQEGDIGTDSDSDLPPPPPPPPDID
YMGALAKKLAMRKQGTPVIQEGDLGADSDSDLPPPPPPPPPPPPLPRAPHKSPPHTPPPP
QQQQLVPTPQQQGPPTQQQGPPQQQAPPSSICSVAPTPTHNAQSSSPQTLREKISGNSIS
NKEIHDIFVSWGILSANPLRRIKSQSATPVHRRTPSSGRVNSPFIRKVSGGYIKTGKLEP
SNTVFQRISDEKVLSTDETDGLTLCLIDTTPLALGVEDVAGNFIVIIPQNTSIPCRKNQA
FTCTDADQTMADIHVYEGCYKEAKNNNFLGHLQIENLGASSPGRSWVTVTMEVDENNVLT
VAVKDNQSGTELISVTIDKEKRNLSKEQVENMAESADIEDYKSLIMVLLSFKSALCNYCG
IITIRGGSIFVVFVGNPLPTYLHPQ
NT seq 6018 nt   +upstreamnt  +downstreamnt
atggcgggcgtgttggcagggtgccagatcgtcctggacctcagcaccagtgttggcttc
aagaagaaacgggaagtcaggagtaccatcacacaaaatggaggagtcatctcctacata
gttaccaagaagagaacacatgttgtgctgaatgatgcagagaaagcagacgtcagctat
aaatgtaaaatggcagcaaagttctgcatccctgtggtttcgctggattttatttttgac
tgtatcagtcaagggaagctactggacacagacaattaccttctggttggaaaaacaaaa
gcacgggaattcagctcaggcaaaatttcagctgaaaaatctgagttgaagccaaaagga
aagaataggaaaactttttttacttttaacccaaagtctgtgaaagcatggaaggagaaa
gacaaaaacatgccaccatttgacgatgaaagcgatgttgcaaagtttgccatgtttcag
attggtgacaagaaaactcacaccacacagtttggagttctggaaatttgtgcttttaga
ggagttactgcccttgaaaataaggatgccacaccgagattctgtgtttgttctcacaga
ggcagtgtagaggatttacagaataaagcagaatgtggaagcaaggagttccgcttcgtg
cagacgtcagaggaggctctgtgtgtgtacagcgccctctataaacagatgaaggacccc
ccgagtggcatgaatgtctgtcacaaacctccctgtcagaatattggaaccaaacagctc
cagaagctaatactggagtatggaatggaagagacagagttatctgctcctgtggcagag
ttgacgcagcacatttggcgggaggcagggggagagatcgagcaagtcctgagtagtcca
ctacagtccatcaaacttgaccaggttgagaaggctacagccattttgacccagatgaag
gagagccaatcagacaacagcaaactccaggctctgtttgatgagttctacacggccctc
cctcaccgacctcaatacaggacaaccagcttctccatgtcatggctggccaggaaactc
gacctatgtcagctaatcaaggacgtggtgtcagtaagtgaggccacgaattggtcgacg
cgaggcaatgccgaggctcagtacaaggccctcagatgtcagatatcccacgtatcagga
ggcctacccagacaggtcctagatatcctcaacctgaaacaaggggaagaaatgagaatt
cagaatgtatatgccatacatcggccctcagagagtgagaatttccgctcagacctgagt
tccaggctgctgtttcatgcctccaatgcagaaaactttgttggaattctctccagaggt
ctcctgatgccaaaggtcgtcgtcgatgactacggaggaaagagaactgatccaggaatg
ctgggacatgggatctattttgcaagctccgcaagtacgagcataaaatactccaaacca
agcaaaaccagaaacacacggatgatgcttgtcagccaggtggcgctaggaaccacgctg
gatgtgtacaaacatcagtgggaccttacagaaccacccagtggctaccacagcgtccat
ggggtggctgccacagagggggtggagtctgactttcaggacgatgagtttgttgtgtac
aacacagaccaacagatgctgagttatctcgttgagttcaccattggcagcgagattcct
gtcgagatttctgttgaaaaagaggttttggaaagggaggaaactccagaagagaccatt
attgacatcagcgatgtacatgatgtcacaaacccattgacaaaggtcaaggctggcttg
gtttctaatgacaacacccctgttactctacttgaagcccatatccgagctaaagtgatc
gacttggcaggggaggtggtggtgttacaagagtaccacaacaatagtgaccaggccctg
gaggctaagtacgtcttcccgctggatgaaatggcggcggtgtgtggctttgaggcgttt
atcaacgggaaacacatcgttggggaggtgaaggagaaagagacggcccaccgggaatac
aagcgggccgtccaggaggggcatggggcgtacctcatggaccaggacaaagaaacaccg
gaggtgttcacggtcagcgtggggaacctccccacgggggctgtggtggtcatcaagatc
acctatgtcacagagctacaggtggacggtgatctcatcaacttccgtctcccaggcagc
gtggcaccatggaaacaaaaatttgttgacgcaccagaattcaaagacaaggactgggat
acagtacaggtgggaaacacctgctgtagtgtacaggtgtatgtagacatgccctttgac
atccggagtctggagtgtcccacgcataaagtactctccaagaggacagctacaaaggcc
gtggtgcagatgaaagacaatcagatgttggaggatggattccagcttctgatcggtcta
gcagaaatccacgttccgcggatgtgggtcgagtccgatgaaggagggtcacaggcatgc
atgttgaccttttacccggagtttgaggctgatgaggagtcagaggttgaggtcatcctg
atgattgacagctccaactcaatgaaggactcctcccaccgtgatgccaaaaaggctgct
ctccttgtgttacatctcatggatccaacatggaggttcaatgtggtctcattcgggaca
gcattcagagaacttttcccatcgagtctaccagccaataaattcaatgtacagacagca
aggcagcatattcagaaattacaagcaaaccagggtaatactgaactctgcaggccttta
cactcttactacctccttaaatcagagagttccaccaggaacatcttccttttctctgat
ggctatatcaacaatgatgaggatactctggtcaaaatatcccagaactctcaacacaca
agggtcttcactataggaatcagctctgtagcaaatcgtcatctcctgaaagcaatagcc
agagttggagcaggctctaatgaattctatgattccaagttcaaatccaagtgggaagat
aaggtcagatcccagttacagaaagcggcccagccagtgctgacctcggtgtccgttgac
tggcgccatgacgaccagcaccctgcaccaatacaagctccacagcaaatcaccgctctg
ttcaacggctcacgccaagtggtctacggattcgtggacaactgctacatggctacccta
aaagcaaagattggtgttcaagagatatctactattgtctcgacctctgacctcagtgtt
acaaagggcaagatgctgcacagattaactgccaagggagtgatccgagattgggaggac
ggagttctctcccctgataggaccggccatgaggttaagaaaatgaacctgaaacaatac
gtcattgagctgagcaagaggtactccattgtgacctcactgaccagctttgtagccatt
gaaaaacgagaaaaggatgaggttgtctcggactctgccccagttataaaggacttactg
accaaggaggatgtagatgtgctgacttacctatcttgggacaatgaggatgaggcagtc
ccagattcttctccagcgatggggggtgtagacatgctgtataataatttttatgcatca
tcggataatgaggaattggaagagctgaaatcaacaaacagtgaagagaaattcttgaga
gaggaaagggggacatcatcaagtgaagaagaagaagaagaggaggaggagattttagaa
gaaaatgggaaaaagggaaggtcaaggaaatttctttcaagaatgcgatcatgcagaata
ccagtgcaggctacagtcccaatggccacgatggcatcagaagtttcctttcaagcttca
ccagataagataattgctgattttaatgtgtatgaggatttagctaagcaagatgtgatg
catgaagaactagacccctctgctaaggccaagtataggatcaagatggggggacttggc
tacaagggggacatagtgagccagggacagaaggacacctgtgttgagagtgaggttaca
ggttccaaaccaagagttgggaaagatatagatgaatctacaggtagccccacattttat
gggtctgctaaaggtttcaaagaatcaactttaaaaataatgagaaaaaggcttgtaagt
ggggggtttttttgcaggaggtcgacaggtgtaatatctgtaaatatagatcaaacatgt
tcactacctcctacactagatcctaaaccacctcctacactagatcctacaccaactcct
acactagattctatgccacagcctcctgtattagctcctaaacctataccaccagcactc
gaagtggagcctaatttttacaattcactatcaaatcgatcccaaacagttttaagtaaa
caggcacgtataccagctttaccaagcatggaagcttctaggtcttctgatgaactgcag
ccctggttaaaatctacacagcctgtttcgtggagatcatgtccattaccccttcgcagg
ccctcaaagaagagagtactttctccaccttcagatccctttgtgtcaatttatgatgaa
tctgaaccactgttgggagaggagaatgatatgaatgttgatatcacgttacaagggaag
ttgctgccttcagaagaaggtgaaaaatcaacaagaggaccggtggtacaggaaggagat
ataggaacagattcagattcagatttgcctccaccaccaccaccaccaccagatattgat
tatatgggtgcacttgccaaaaaactagccatgagaaaacagggcacacctgtgatacag
gaaggagatttaggagcagattcagattcagatttgcctccaccaccaccaccaccacca
ccaccaccaccactaccacgtgcaccacataaatcaccaccacatacaccaccaccacca
caacagcaacaactagtaccgaccccacaacaacaagggccaccaacacaacaacaaggg
ccaccacaacaacaagcaccaccaagttctatatgttcagtggcccctacacctacccat
aatgcccaatcatcaagtccacagactctgagagagaaaatatcagggaattctatttct
aataaagaaatacatgacatatttgtttcatggggaattttatcagcaaatcccttacgt
agaataaaaagtcaatcagctactccagttcatcgtagaactccatcatcaggaagagtg
aacagtccatttattcgcaaggtcagtgggggttatataaagactggaaagcttgaacct
tcaaacacagtgtttcagagaataagtgatgaaaaagttttgtctactgatgagacagat
ggattaaccctttgtttgattgatacaacacctttggctcttggcgtcgaagatgtggct
ggcaattttattgtcattattccacaaaataccagtataccctgtaggaaaaaccaggct
ttcacatgtactgatgctgatcagactatggctgatatccatgtatatgagggctgttat
aaagaggccaaaaataacaacttcctgggacatcttcagattgagaaccttggagcctct
tctcctggaaggtcctgggtcaccgttaccatggaagtcgatgaaaacaatgtactcaca
gtagcagtcaaagacaatcaatcaggaacagaactcatatcagtgactattgataaagaa
aagaggaatttgagcaaggaacaagtagaaaatatggctgaaagtgcagatatagaggat
tacaagtctctaattatggtactgttaagctttaagtctgctctatgcaactactgtgga
atcattacaattcgtggtggatcaattttcgtggtattcgtgggtaaccccttgcccacg
tatttacatcctcagtga

DBGET integrated database retrieval system