Magallana gigas (Pacific oyster): 105348806
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Entry
105348806 CDS
T03920
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 5
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg00061
Fatty acid biosynthesis
crg00071
Fatty acid degradation
crg01100
Metabolic pathways
crg01212
Fatty acid metabolism
crg04146
Peroxisome
Module
crg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
105348806
00071 Fatty acid degradation
105348806
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
105348806
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
crg01004
]
105348806
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105348806
Enzymes [BR:
crg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
105348806
Lipid biosynthesis proteins [BR:
crg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
105348806
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of breast milk
105348806
Exosomal proteins of breast cancer cells
105348806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
SmaI
Motif
Other DBs
NCBI-GeneID:
105348806
NCBI-ProteinID:
XP_034314891
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Position
7:complement(42305162..42330579)
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AA seq
687 aa
AA seq
DB search
MNRKMSAFLGDAGALSIGAGVVTAVTAAAATYYLSTRPEPNVLPTIDLNDQAVVLEDGTR
LSRFIKDGKLMKNLYDDVKTLYDAFQRGMKISGDEPCLGTRTGPNLEYQWMTYKEVFENS
QAFGSALLARGLKPNDSSFIGIYSVNRPEWVFTEQACSMFSMVSVPLYDSLGPDACKFII
KQGDIGYVVCDTAQKTKNLLAKADQCPSLKCIIMMETPSEELKTEASKCKVDLVQFSDFL
ELGKKNLKEPMPPKESDLATICYTSGTTGDPKGVMLTHANLISNMSAVAKTALMAISVNS
NDVHISYLPLAHMFERGMQIICFMHGCRIGFFRGDVKLLTDDMQALKPTLFITVPRLLNR
IYDRIVNSVQGSALKSKLLEWAVKAKTKEVESFIVRKDSIWDKLVFGKVQKLLGGRVKIV
ITGSAPLEAKVFNFIRAAFGCVVMEGYGQTEATAGITFSIAGDPSTGHVGCPLPCCKVKL
VDVPEMGYYAKDNKGEICSYGPSTFIGYFKNEEKTKETIDDDGWLHTGDIGQWLPNGTLK
IIDRKKNIFKLSQGEYIATEKIENCYGRSQFVAQAFVDGNSLKNNVVGIIVPDPEVMPGW
AEKEGISPDMTELCKNKKVKEMIFKDIVRIGKEAGLKTFEQVANITLYPELFSLENNLLT
PTFKNKRPVLRKKFQSVIDDLYAEIEK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaaaatgtcagccttccttggtgacgctggagccctaagtatcggagctggt
gttgttactgcggtaactgctgctgctgccacctattatctgtccacaagaccagaacca
aacgtccttccaaccattgatctcaatgatcaagcagttgttttagaggatggtacaaga
ttgtccaggtttatcaaagatgggaaactgatgaaaaatttgtatgatgatgtaaaaaca
ttatatgatgcatttcaaagaggaatgaaaatatcaggagatgaaccatgtcttggaact
agaactggaccaaatttagagtatcaatggatgacatacaaagaggtgtttgaaaactct
caagcatttggttcagctttgttagccagaggtctaaaaccaaatgattcatctttcatt
ggcatctacagtgttaacaggccagagtgggtgtttacagagcaggcatgtagcatgttt
tcgatggtctctgttcctctctatgattccttgggacctgatgcatgcaaattcatcatc
aagcaaggtgatattggatatgtggtttgtgacactgctcaaaagaccaagaacttgcta
gccaaagcagaccaatgtccctccctcaaatgtataataatgatggagaccccctcagag
gagctcaagaccgaggcatccaagtgtaaagtagatctggtacagttcagcgatttcctg
gaacttggcaagaagaatctgaaagaaccaatgccccctaaggaatcagatttagctaca
atctgctacacaagtggcacaacaggtgatcctaaaggtgtaatgttgacacatgccaac
ctgataagtaacatgtcagctgtggcaaagactgctttgatggccatatcagtgaatagc
aatgatgttcatatttcgtatcttcctttggctcacatgtttgagagagggatgcagatt
atttgttttatgcatggatgtagaataggatttttccgtggagatgtgaagttgttgaca
gatgatatgcaggcattaaaacccactctctttatcactgtccccagacttttaaacaga
atctatgacaggattgttaatagtgttcaaggcagtgcactaaaatcgaagcttttggag
tgggctgtgaaagctaagaccaaagaagttgaaagttttatagtaagaaaagacagcatt
tgggataaactggttttcggcaaggtacagaaattactgggtggcagagtgaaaattgta
atcactgggtcagctccactggaggccaaagttttcaacttcatcagagcagcttttggt
tgtgtggtgatggagggatatggacagacagaggccacggctgggatcactttcagtata
gcaggagacccatcaacaggccatgttggttgtccacttccatgttgcaaagtaaaactt
gttgatgtacccgagatgggttattatgctaaggacaataaaggagagatctgcagctat
ggcccatccacattcattggttactttaaaaatgaagagaagacaaaggaaacaattgat
gatgatgggtggcttcacacaggagatattggacagtggctaccaaatggtacactgaaa
atcattgacagaaagaagaatatttttaaactttcacagggggaatacatagccacagaa
aaaatagagaactgttatggtagaagtcaatttgtggcacaagcatttgtggatggcaac
agcctcaagaataatgtggtgggaataattgtaccagacccagaagtcatgccaggctgg
gctgaaaaagaaggaatttccccagacatgacagagctctgcaaaaataagaaagtgaaa
gaaatgatattcaaagatatagttcgaattgggaaagaagcaggattgaagacttttgaa
caggttgcaaacattactctctatcctgaattattctccctggaaaataacctactgaca
ccaacttttaaaaacaaaagacctgttctacgaaagaaatttcaatctgtgattgatgac
ctgtatgccgaaattgaaaagtga
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