Magallana gigas (Pacific oyster): 105348830
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Entry
105348830 CDS
T03920
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105348830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105348830
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105348830
Membrane trafficking [BR:
crg04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
105348830
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105348830
Exosomal proteins of colorectal cancer cells
105348830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
DUF5424
YfeC-like
GRAM
Motif
Other DBs
NCBI-GeneID:
105348830
NCBI-ProteinID:
XP_011456694
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All DBs
Position
2:complement(37898536..37906432)
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AA seq
380 aa
AA seq
DB search
MDRLEWSDTNLVPGEEQVNLQPGIAVYDGQDKTCFENGVLTLTTHRVIWKDNRDRTRVLA
LQHSLVVYIEEQPSGFAKSAKIAVHVSAPGPSKKPGPVTQSRYDYIRFSFREAGEGQFFR
DYNEQLQQKKWEHVIPQRKPGASRHRAGIMGIERTIQQTHANTDKNISQAFQDLTKLMEK
AKEMVAISKSIATKIKDKQGDVTDDETIKFKSYLLSMGIPNPVTRDTHGSGDKYYTELAR
QLSSVLEKPLKECGGIMTLTDVYCRVNRARGMELLSPEDLLNACEMFELLRLPVRLKTFD
SGVMVLQLQSHDEDQVIHLTTQLVEDKGSITAEDLSKEVGVSVILAKERLLLTEKVGGIC
RDECVEGLRFYPNLFLTNVT
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtcttgagtggagtgacacaaatcttgttcctggagaggaacaagtaaattta
caaccaggaattgcagtatatgacggacaagataagacctgctttgaaaatggagtacta
acacttaccactcacagagtgatatggaaagataatagagacaggacaagagttttagcc
ttgcaacatagtttagttgtgtatattgaagagcagccatcagggtttgccaaaagtgca
aagattgcagtacatgtgtcagcccctggacccagtaagaagcctgggccagtgacccag
agtcgctatgactacatccgattttccttcagagaagcaggggaaggacagtttttcaga
gattataacgaacaactacaacagaaaaaatgggagcatgttatacctcaaaggaaacca
ggtgcatctcgacacagagctggtattatgggcattgaacgaaccattcaacaaacacac
gctaacacagacaaaaacatttctcaagcgtttcaagatctaacaaaactgatggaaaag
gccaaagaaatggtagcaatttccaaatctatagcaacgaagatcaaagataagcaagga
gatgttacagatgatgagacaataaaattcaagtcctacttgctgagtatgggtattcct
aacccggtcaccagggacacgcatgggtcaggagacaagtactacacagagctggcccgg
cagctgtccagtgtcctagaaaaacccctcaaggaatgtggtggtataatgacactaact
gatgtgtactgtcgagttaacagggcacggggaatggagttattatctccagaggattta
ctgaatgcatgtgaaatgtttgaacttctacgactccctgtcagactgaagacatttgac
agtggtgtgatggtgttacagctacagagtcacgatgaagaccaagtcatccaccttacc
actcaactggtggaagacaagggttccataactgctgaagacttgtccaaagaagtgggc
gtgtctgtaattttggcaaaagaaaggttacttctgacagagaaggtcggagggatctgc
agagacgagtgtgtggaaggactgagattttatcccaatctgttcttgaccaacgtcacc
tga
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