Magallana gigas (Pacific oyster): 105349006
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Entry
105349006 CDS
T03920
Name
(RefSeq) scavenger receptor class B member 1
KO
K13885
scavenger receptor class B, member 1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03272
Virion - Hepatitis viruses
crg04145
Phagosome
crg04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
105349006
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105349006
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
105349006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
105349006
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crg04147
]
105349006
Membrane trafficking [BR:
crg04131
]
Endocytosis
Phagocytosis
Scavenger receptors
105349006
Exosome [BR:
crg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105349006
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
TMEM100
Motif
Other DBs
NCBI-GeneID:
105349006
NCBI-ProteinID:
XP_034337870
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Position
3:13683559..13703679
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AA seq
499 aa
AA seq
DB search
MEWCTVRKQYCGLGLGLLMLAVGVALIPIVDYIIKREVEKTVILKEGNLMYNTWRDLPIP
IYMQFYMFDCLNPEEVLNGAKPYVVEKGPYTYIEKRIKYDIIHNSNGTVTYKQNRTFHFV
EKLSVGPESDRFTTPNPVYWSLVSALRYENKDINWLINFLTTFKQEYVFMNRTVKEILWG
YQDPALHFAKAYDPEWFYTDIAGYFINKNATNDGVYTIFTGETDITKLGHIDQYNGSRYL
NFWTTKWANMINGTDATVNPPFAKKSRVSYAFASDVCRSIKGVFAEEVTDSHGFTLWRYT
SPDSYVANATVNPDNIGFCTPNCLDKGLFNMSTCQIIDFFHIPAAISLPHFYLGAERYQK
AVIGMRPNKEEHQTIIDAEPTIGWVLRAAKRLQINLYIQPIKGFELTTKITPVFLPVLWL
NESAVIDEKNAQMLQNMLFTPLKVVHVVEIVLITAGSVLLVATIAYIIYAWQRRKTEIMK
EAETSSVNDTNQLLSNGTS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggagtggtgcactgtgaggaagcagtactgtgggttgggcctgggtctgctgatgctg
gcagtgggtgtggcactcatccccatcgtggactacatcatcaagagggaagtggaaaag
actgtaattctgaaggaggggaatttgatgtacaacacttggagagaccttcccatccct
atctacatgcagttctatatgttcgactgtctaaatccagaagaagtccttaatggagca
aagccctatgttgtagaaaaaggcccatacacttacatagaaaaaaggataaagtatgac
atcatccacaacagtaatggtactgtgacgtacaaacagaacagaaccttccattttgtg
gagaaactgtcagtgggcccagagagtgaccggtttaccacacctaaccctgtttactgg
agtcttgtcagtgccttgagatatgagaacaaggacatcaactggctgatcaatttcctg
acaactttcaaacaggagtatgtgtttatgaaccggacagtcaaggagattctgtggggc
taccaggacccagcccttcattttgccaaagcatatgatcctgagtggttttacacagat
attgctggctatttcatcaataaaaatgccaccaatgatggagtgtatacaattttcact
ggtgagacagacatcacaaaacttgggcacattgatcaatataatggatccagatatcta
aatttttggacaacaaaatgggccaacatgataaatggaacagatgccactgtaaatccc
ccttttgccaagaagtcccgtgtgtcctatgcatttgcttcagatgtttgcagatcaata
aaaggggtgtttgctgaggaggtcacagattcgcatggtttcacactgtggaggtacact
tcccctgattcctatgtagccaatgctacagtcaaccccgacaacattggcttctgtacc
cccaactgtctggacaaaggactcttcaatatgagcacctgtcagataattgacttcttc
cacatcccagcagccatttccctgcctcatttttaccttggagccgagaggtaccaaaaa
gctgtgatagggatgaggcccaataaagaggagcaccaaacaattatagatgcagagcca
acaattggctgggtgcttagggcagccaaaagacttcagatcaacctgtacattcaacct
atcaaaggattcgaactgaccaccaaaatcaccccagtttttctaccagtgttatggcta
aatgagagtgcggtgattgatgagaagaatgctcagatgctacagaacatgttgtttacc
ccgctcaaagtggtacacgtggtggagattgtcctcataaccgcggggtctgttctccta
gtggcgacaatagcttacatcatttatgcatggcagcgaagaaaaacagaaataatgaaa
gaagctgagacttcttctgttaatgacaccaatcaactgctgtctaatggaacgtcatag
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