Magallana gigas (Pacific oyster): 105349039
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Entry
105349039 CDS
T03920
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3 isoform X1
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
crg04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
105349039
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105349039
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crg04040
]
105349039
Ion channels [BR:
crg04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
105349039
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
105349039
NCBI-ProteinID:
XP_034330349
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Position
LG4:35775802..35782864
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AA seq
434 aa
AA seq
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MLEVETVDSKKTVDENVKLAKVFKALSSNIEKNNELLNRLLELTLESESNHQGLAPLRSI
LSKDLSALREDKVTVEIKLTFLKINDIDTVDQKFLSEIFIQAKWHDHLIKPDEKVFEPSM
MWTPKLIILNIDGSIEEEHIDYSILHSNDDNPPRVQLMWRFKAFFKENLELQHFPVDVQD
LTISISTERSIHEIEIIEDQSSLSSVNTQAFLDASEWNLYNHTESYRDKTTVEYARSTVH
PILHIQCRVARKIGYFVWNIIFIVFLIIGLTFASYSIEVNSPDRLMCNVTLFLTAVAFKL
VVKQSLPTISYLTYLDLYVLAALIFLALNATQNAAMKSLAYVYQMKEVKIYDRNAIASLA
AIFIFFHVIFGIYIAFTATRRRWKMQEKDKLYQEKKDYIERSRMSPRGTGKRKRRYPPVA
QPRGSLESFFENRF
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggtggagacagtggactccaagaaaacagtagatgaaaatgtcaagttagcc
aaggttttcaaagctttatccagcaacattgagaaaaacaatgaactccttaatcgactt
ttggaattaacacttgaatcagagagcaatcatcaaggattagcacctcttcgatcaatt
ctgtcaaaagatctcagtgctctgagagaagataaggtgacagtagaaataaagctcact
tttttgaaaataaacgatattgatacagtggaccagaagtttctgtcagagattttcatc
caagcaaagtggcatgatcacttgatcaagccagatgaaaaggtttttgaaccatcaatg
atgtggactccaaagttgattattttgaatattgacggatcaatagaagaggaacacata
gactactctattctacatagcaatgatgataatccaccaagagtgcagctgatgtggaga
ttcaaagccttctttaaggagaatttggaattgcaacactttccagtggatgttcaggac
ctgacaatttccatctctacagaaaggtcgattcatgagattgagataattgaagaccag
agttctctcagttcagtcaacactcaggccttcctggatgcctcggagtggaacctgtac
aaccacactgagtcctacagagacaaaacaactgtcgagtacgctaggtcaactgtccat
cctatccttcatatacagtgcagggtggcaaggaagataggctattttgtgtggaatatt
atattcattgtgttcctgatcattggcctgacctttgcctcctactccattgaagttaat
tctccagacagactgatgtgcaatgtcacccttttccttactgctgtcgccttcaaactg
gtcgtcaagcaaagtctgccaactatttcatacctcacttacctggatctgtatgtactg
gctgcactgatatttcttgcattgaatgctactcaaaatgctgcaatgaaatccttagct
tacgtataccaaatgaaagaagtgaagatttatgatcgcaatgccattgccagccttgct
gctatcttcatattttttcatgtcatctttgggatttacatagctttcactgccaccaga
aggcgatggaaaatgcaggagaaagacaaactttaccaggaaaagaaagattacattgag
agatcaaggatgtcacccagaggtactggtaaaagaaagagaagataccctcctgtggcc
caaccaaggggatctctcgagtccttcttcgaaaatcgcttttag
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