Magallana gigas (Pacific oyster): 109617380
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Entry
109617380 CDS
T03920
Name
(RefSeq) eukaryotic translation initiation factor 4B isoform X1
KO
K03258
translation initiation factor 4B
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
109617380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crg03019
]
109617380
03012 Translation factors [BR:
crg03012
]
109617380
Messenger RNA biogenesis [BR:
crg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109617380
mRNA cycle factors
Stress granule specific factors
109617380
Translation factors [BR:
crg03012
]
Eukaryotic type
Initiation factors
eIF-4
109617380
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
109617380
NCBI-ProteinID:
XP_034329113
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All DBs
Position
5:complement(16178332..16186863)
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AA seq
718 aa
AA seq
DB search
MAAQGKKKMKGKTINLTEFLSDEKGGSPAPTYSSNKIDWAAEMDSNDLEDLDLDLQRSMI
DRSKLPTAPKAARGPDVDLGRIPNQPPYTAFIGNLPYEATEDLIENFFKNLKVVNVRLPT
DQGRLRGFGYVEFEDRQSLIDALGLNDENMGGRKMRVDLAGQNQNENQKSGFGDRRNEGP
DRTDSDWRRGPPPESDFDRNDRRGGGSDRWGGGRGFEDRGSRGYDRDDRGPSRGFDRDDR
GPSRGFDRDDRGPSRGFDRDDRGPSRGFDRDERGPSRGFDRDDRGPRGYDRGDRGFDRDR
GGFDRSGGPRDDWNSRRDFDDRGPSRGFDRDGGRGYRDRGFESGGDRGYDRRSRDRYDDR
DRGYGSGFRRDDRRDDGYDRPRSDRPRSPEGGRDAPVERPRLNLQPRTKPVENEGPKNPG
SAPEKKASIFGAAKPVDTAAREREIEERLAKQRLEESKRAEEEKENRNVGGRSGRPRQDS
ENSQDGNRRDSFEGSRRERRLSSNSSSKGGRSGPSHGRPRKDSEKSNHSQEVFSGGEEGK
DEPKSPLSPVHREDPVKLVPAPPPPVNAWNKRKVETAQKPGNPGDGKSPPQSNSQVPAKS
ETKSNPTSAEPPATNAWAKGKPADLRSSESAWNNLPPKGKSEERGGFPGEGRGGSSRGGR
GRGTPTRGRGGKQKVPREKPIPKSIDEMPKFEEKEKKVWTDANKFAGLISDEDVENED
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcaggggaagaagaagatgaaagggaagacgataaatctgacagagtttctg
tcagatgaaaaagggggaagcccagccccaacgtactcatctaataaaatcgattgggca
gcagagatggattctaatgatttagaagacttggatttagacttgcagcgatcaatgatt
gacagatccaagttacccactgcccccaaggctgcccgagggcccgacgtagatctcggt
cgaattccaaaccaaccgccatacacagcattcattggaaatctgccctatgaagctaca
gaggatctcatagaaaattttttcaaaaatttaaaggtggtcaatgttagactaccaact
gaccaagggaggctaagagggtttggatatgtagagtttgaggacaggcaatcactgatt
gatgccctgggtttaaatgatgagaacatgggaggaaggaagatgcgtgttgatctagca
ggacagaatcaaaatgaaaatcagaagagcggattcggagatagaagaaacgaggggcca
gacagaactgactccgattggagaagaggaccccctcccgaatcagattttgatagaaat
gacaggcgtggtggcggaagtgatagatggggaggaggaagaggatttgaggataggggt
tccagggggtatgatagggacgacagaggtccatcaagggggtttgacagagatgatagg
ggcccatcaaggggctttgacagagatgatagaggcccctcaaggggttttgacagagat
gacagaggcccttcaaggggttttgacagagatgaaagaggcccatcaaggggttttgat
agagatgataggggacctagaggctatgatcgaggagacagaggatttgaccgcgataga
ggtggctttgatagaagcggtggtccacgagatgactggaattctagaagagattttgat
gaccgaggcccatctagaggttttgacagagatggtgggaggggatacagagaccggggc
tttgagagtggaggagacagaggatatgatagaaggtccagggatcggtatgatgataga
gatagaggctatggatctggttttagaagagatgacagaagagatgatggctatgacaga
cctaggtcagacagaccaagaagtccagagggtggtcgagatgcaccagttgagcgacca
aggttaaaccttcaaccaagaaccaaacctgtagaaaatgaaggtcccaaaaatcctggc
agtgcccctgaaaagaaagcctccatctttggagcggccaaaccagtagatacggcggca
agggagagagagatagaggaaagattggcaaaacagagattggaagagtcgaagagggca
gaggaggagaaggaaaatagaaatgttggtggtcgaagtggtagacctcgtcaagatagt
gagaattctcaagatgggaatagacgagactcatttgaaggcagcaggcgagagcgaaga
ctcagcagcaatagctcgagtaaaggaggacgatcgggtccttcccatgggcgacccaga
aaagacagtgaaaaatccaaccactcccaggaagttttctctggtggggaggagggtaag
gatgagcccaagagtccactctcacctgtgcacagagaggatcctgtcaagcttgtgcca
gccccaccacctccagtcaatgcctggaacaagaggaaagtagagactgcccagaaacca
ggcaacccaggtgatggaaagtcaccaccacagagcaattcccaagtccctgccaagagt
gaaactaagtcaaatcctacatctgcagaacctccagctaccaatgcttgggcaaagggt
aaaccagcagaccttaggtcgtctgaatctgcttggaataacttgcctcccaaaggtaaa
tcagaggaaagagggggatttcccggtgaaggcaggggaggatcgagtcgaggcgggaga
gggcgagggacaccaactcgtggacgagggggaaaacagaaagttccaagggagaaacca
atccccaaatctatagatgaaatgcccaaatttgaggaaaaggagaaaaaggtttggact
gacgccaataaatttgcaggccttataagtgatgaagatgttgaaaatgaagattag
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