Magallana gigas (Pacific oyster): 109618389
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Entry
109618389 CDS
T03920
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2 isoform X1
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crg03400
]
109618389
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
109618389
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
109618389
NCBI-ProteinID:
XP_034329925
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Position
5:16878213..16910695
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AA seq
314 aa
AA seq
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MFTNKADAPEVDEHSIMVLRTGKVQRFQTTTELCKHIMASSESDDQRQRGVHESSYSKNE
SKRIRLLSWNIDGLDCPTAEKRTYTICEIIKTVNPHVVLLQEVVLETFAILCKKCPEYRI
IPGDITGYFVAIMLKIEDLEFIGKSIFPYPFSVFGRNLLTVQCRLKGVPFIFMTSHLESM
AALSELRRIQLGSCFRRMKRESANYTVIFGGDMNLRDWELSEMGGIPEGISDVWEMTGSR
LNCEFTWDLLLNTNKKFDSDHKPRLRFDRIYLRDSDPKSVSPMYFELVGLEKLRVYEVFP
SDHFGLLTHFDIRC
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaaacaaagcagacgccccggaagttgacgagcatagcattatggtacttcga
acaggaaaagtacaacgcttccaaacaacgaccgaactttgtaaacacatcatggcttcc
tcggagtcggacgatcagaggcaaaggggagtacacgagagttcatactccaaaaacgaa
tcaaagagaatccgtttgttaagttggaacatagatggtttagactgcccaacagcagag
aaaaggacatacacaatctgcgaaatcattaaaacggtaaatccccatgtggttctactt
caggaggtagttttggaaacttttgcgatcctctgtaagaaatgtcctgaataccgtatc
attcctggcgacataacaggctattttgtcgccattatgttgaaaattgaagatctagag
ttcataggcaaatcgatatttccatatccattcagtgtctttggaagaaacttattaaca
gtgcagtgtcgcttgaagggtgtacctttcatctttatgacgtcacacttagaaagtatg
gcggctctcagcgagttgaggagaatacagctaggaagctgttttcgtcggatgaagagg
gaatctgcaaattatacagtcatatttggcggcgatatgaaccttagagattgggagctc
tctgaaatgggtggcataccggaagggatctctgacgtttgggagatgacggggtcaagg
ttgaactgcgagtttacgtgggatttgctcctcaacacaaacaagaagttcgattccgac
cacaagcctcgccttcggtttgaccggatctacctgagggattccgatcccaaatccgtt
agcccaatgtattttgaattggttggcttagaaaaactgagagtatacgaagtgtttcca
agcgaccattttggacttttgacacacttcgatatcagatgttaa
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