Magallana gigas (Pacific oyster): 109619925
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Entry
109619925 CDS
T03920
Name
(RefSeq) polycystin-1-like protein 2
KO
K04988
polycystin 1L2
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crg04040
]
109619925
04091 Lectins [BR:
crg04091
]
109619925
Ion channels [BR:
crg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
109619925
Lectins [BR:
crg04091
]
C-Type lectins
Others
109619925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
REJ
PLAT
Laminin_G_2
Laminin_G_1
GPS
DUF1583_N
Motif
Other DBs
NCBI-GeneID:
109619925
NCBI-ProteinID:
XP_065944211
LinkDB
All DBs
Position
6:50906771..50952312
Genome browser
AA seq
2093 aa
AA seq
DB search
MDTRLTFITLHLVFCFPYVFCIDEFGFSGQSPLELKVLSGERSLESFILEMSFKSYTTDG
LLIVHRSTSSSDFYTVSVHNMTLAFWLQSSNKLLKTESIHPLNYDEWNNITLVKTNRLIS
LSLNDCPVIESETQLSGRTEYLIELGEILYLGGHHTPSQLTGLSPTAQVFTGCVRELKFT
AQISTWKNLCFWCSFTKSVEYRLSQDTVTVDLLRRGLIKNCDTTRLCQYSLTVNNIQPIV
ANLCHWAESDISIATNVTSNCSGLLISYDWSLHYLFGSYVTISDGSRYSLPDTTQLNRSV
LSLTVGADHSSYLVNGVYGVHLTLVVTSDTDKARLIQQGYFIIGCPDVEKAGSDFSCEWL
NEILSRDLHLAIRIQRTIHCRNTAPVTTIGHLQKTTEFWNLEEQAKNISAHTKKLTIYHP
PLQIQCLSGCGDKVNPGENLTVLSMCRSCVTHSWAVYGCGSLCDTEVKVADRPQNESVFS
FHVNNSFVNQQVVYIGTYPTGRNVRAVYNLTLNEPPILGNCSIIPQSGRTLLTGFNVSCQ
GFFDPDSPLTYTLYQIQSTGKKTKLMKSDEAFIPALYLSEGPTENNHTLSLVVVCKDSMG
LESFALPLSVTVLPLASGSDIVDVISGNVLGNSSSTGIISDLLAAGQQSAVTQILQTSVL
ALNTDAATNASNTDRKQQRTEVREAVVAILANSSTSSPDIETVTSILNTATEIQEELSPQ
IQEQATVLYEGMTSAFSNKSANVSQSAAEKTAGLLLEGVTMLLDTRTSYGTKILHMGPPN
DTLQKEVKSSAERLLGIVDKITDIMMDYITPDAAPSVFTTSKMNLALSKASPSQLGGKKL
SLDRGNNSGDFTIPSDGKLSTLLSNTSFTSIQVMLTEKNPYIWDPASDSLTTPMVSLTLR
DDLDQKLNVTSLTNPVDVYISNFNPVIQKSEENFTLSVQDFDSFNATQTTELCRIMTFNS
TEGRSTVFTVRPLTFNLTVNVIEVQNRTNMSHLNVRAAGVSLSKLNNFTHIFSSFPTGEV
SLAFCIDQTVDNYLELSRQCLTLTSCGLTLETQLYFAVCMYWNVTEDKWSSSGCQVGQQT
TPASMHCQCTHLTAFSGSFLVAPNFVDPFADAALFLTFFSNPVVVSCVILIWLIYFTLLT
WAKKQDRLDKYRGGVIIAHENNPDHKYAYLVCVITGWWKNAGTTSSVSLSFAGTEGHSGR
HCLSESVPGRQCFLSGYEDWFLVTTSHSLGDLRSLSVWHDSSGKSPHWYLSRILIEDLQT
QQTWTFLFSDWVAVDRGSVSLKVTLQPCSLEDLKSQTNQQFLFKSSRDLRESHLWLSIAS
KPSYSSFTRAQRLSCALCLLLMTMLTSLMFHGIPTDDPADQARVSYITISLSDLVIGVQS
GLIMFPVNILIIQLFLKAKKKPRGTTPVRVKKKRKKQKKNSVSGIEAGEGSETLEEEEEE
EREPAKEDGLLPWWTVYIAWTLVISLSVVSSYFVMLYGLKYGYQKSVDWLVSFFTAFFQS
AFITQPFKVIAISLVFTMILKKPVVVQGGKASTEKMSEQFDSADKPQSRYVPDPLSRRLM
NRIRKKLKLEEEIHVTLRDIALYALFVICILFMAHGHRNVGKSLMMRRYMESVFIEPRHP
PIYSQASGFSTDILELNNIANVELFWSYIKERIVPVLGEMSLGNATAPGLVSEYFLLGKY
RIRQVRIQEDSCDYPEWVRRKTMTFSMNCSGEYWIGNEDSGDYNMSWREPLTYKPKRLSD
TWSHRSSWSLKTIPYEGTLATYSGGGYTVLLDGNVSQSLSMIQDLQDSSWIDHRTRAVFV
EFTTYNANIKLFCVVMIPFEFSNLGVIYPSYQIFSTKNFTYSSPLEVFTALCEILFVIFA
LAFFYFEIKRFYYGGRAKYFSDPWSYVEIIQIIMSFSIVGLYLKKIVSVSAKLTDLHITE
EFVSFYTSIFWDMTLNYILAFFVALVILKFFKYLKFNVRMYFMSQTLSIAKKNLLGFSLM
VVIIVVAFAHFAVFTFGPIVKGFSNMGQSLITLFQLALGESDFYPIQQANRYMGPAFFFL
YIFLVQWTVLVMFMAILNLAIEETKSNMAQMKNDLEVVDYIYNRIHQILPKCH
NT seq
6282 nt
NT seq
+upstream
nt +downstream
nt
atggacactaggttgactttcataacactccatcttgtgttttgtttcccatatgtattt
tgtatagatgaatttggattctcagggcagagtcccctggaactgaaagtcctgtctggg
gagaggagcctggagtcgtttatcctggagatgagcttcaagtcttacactaccgatggg
ctgttgattgtccatcgctcaacttcatcatcagatttctacaccgtatcagtgcacaac
atgacactggcattctggttacagtcttctaataagttgttgaagacagagagtattcat
cccctcaactatgatgaatggaacaacataactctggtgaagacaaacagactgatctct
ctgtctcttaatgattgtcctgtcattgagagtgaaacacaattaagtgggagaacggaa
tacctaattgagttgggtgagatcctgtaccttggaggacaccacaccccctcacagctg
accggtctaagccccaccgcccaggtgttcacaggatgtgtcagggagctcaagttcaca
gcacagatatccacatggaaaaacctatgtttctggtgttcatttactaagtctgtagag
tataggttgtcacaggacacggtgacagttgatcttctcaggagaggcctgatcaagaac
tgtgacacaaccagactttgtcagtactctctaactgtcaacaacatccaaccaatagtc
gcgaatctctgtcattgggcagaatcagacatctccatagcaaccaatgtaaccagcaat
tgttcgggtcttctgatttcctatgattggagcctacattacctctttgggagttatgta
actatatcagatggctctcgatacagccttcccgacactactcaacttaaccggtcggtc
ttgtccctgacagtgggagctgaccacagcagctatcttgtgaatggggtgtacggtgtc
catctgaccctagtcgttacctcggacacagacaaagcaagacttatacagcagggttac
tttattattggatgcccggatgtagagaaagcagggtcagatttcagctgtgaatggctg
aatgaaatcttatccagggatctccatctggccatcagaatccagagaaccatacattgt
agaaatactgcacctgtcacaaccataggacatcttcagaaaactactgaattctggaac
ctggaagagcaagccaaaaatatttcagcccacaccaagaagctgactatttaccacccc
ccactccaaattcaatgcctgagcggctgtggggacaaggtgaacccaggggagaacctg
actgtgctaagcatgtgtaggtcctgtgtaactcactcctgggcagtgtatgggtgtgga
tctttgtgtgacacagaggtcaaggttgctgaccgccctcagaatgagtcagtgttcagc
ttccatgtgaacaactccttcgtcaaccagcaagtggtctatatcggaacttatcccaca
ggtagaaatgtgagagcagtgtacaatctgactctgaatgaacccccaattcttgggaac
tgttccatcatcccccagtcaggacgcaccctcctgaccggcttcaatgtatcctgtcag
ggattttttgaccctgattccccactgacttacactctctaccagatccagtctacaggt
aagaagacaaaacttatgaaatctgatgaagcgttcatacccgctctgtacctgagtgag
gggcccacagagaacaaccacaccctgtcactagtggtggtgtgtaaagacagcatgggc
ttggaatcatttgccctgcctctcagtgtcacggtactgcctttggcatccggctcggat
attgtggatgtgatttctgggaatgtcctcggtaactccagctccacagggataatcagt
gacctactggcggctggacagcagtcagccgtgacacagatcttacaaacctcagtgcta
gctctgaatactgatgcagcaacaaacgcaagcaacacggacaggaaacagcagcgcaca
gaggtcagagaagcagtggttgccattctggccaattcttccactagttccccggacatt
gagacggtcaccagtatcctaaacacagccacagaaatccaggaagaactatccccacaa
atacaggaacaggcaacagtcctatatgaaggaatgacttcagctttttcaaataagtca
gctaatgtttcccaaagtgcagctgaaaaaactgcagggctgctgttagaaggagtgacc
atgctgctcgacacacggaccagctacggtacaaagattctccacatgggaccacccaat
gacaccctacagaaggaggtcaagagttcagcagagaggcttctgggtattgtggacaag
attaccgacatcatgatggactacatcacccccgatgctgccccgtcagtgttcaccacc
tcgaagatgaacttggctctgtccaaagcctcaccttcacaactggggggcaaaaaactg
tccttagacaggggaaacaactctggtgattttacgatcccctctgatgggaagttgtct
accttgttaagcaatacctcctttacaagcatccaggtgatgctgactgagaaaaatccc
tatatctgggaccccgcctctgactctctgaccacacccatggtgtccttgaccctcaga
gatgaccttgaccaaaagctcaatgtcaccagtctcacaaaccctgtagatgtttacatc
tccaactttaatccagtgatacaaaaatcagaagaaaacttcacactaagtgtacaagat
tttgatagttttaatgccacacagacaactgaactgtgcagaataatgacctttaactcc
acagaaggaagatctactgttttcactgtgcgacctttgacatttaacctcactgttaat
gtcattgaagttcagaacagaaccaacatgagtcatcttaatgtcagggctgcaggagtc
tcactcagtaaactcaacaactttacacacatctttagttcctttccaactggagaagtc
tctctagcattctgtattgaccagacggtggataattacttggagctgagccgtcagtgt
ttgaccttaacctcctgtggtttgaccttggagacccagctgtactttgctgtgtgtatg
tactggaatgtcacagaggacaagtggtcttcaagtggatgtcaggtaggtcaacagaca
accccggcttccatgcattgtcagtgtacacatctgacggctttctccggtagtttcttg
gtggcgcctaactttgttgacccgtttgctgatgcggcgctgttcctgaccttcttctct
aacccggtggtggtctcctgtgtgatcctgatctggctgatctacttcactctgttgacc
tgggccaaaaaacaggacagactagacaagtacaggggtggagtcatcattgcccatgag
aacaaccctgaccacaagtacgcgtacctggtgtgtgtaatcacagggtggtggaagaac
gccggcaccacctccagtgttagcctgtccttcgctggaactgagggccacagtggccgc
cactgtctgagcgagtccgttccagggagacagtgcttcctgtcaggatatgaggactgg
ttcctggtcaccaccagccacagtcttggggacctccggagtctctcagtgtggcatgac
agctctgggaaatccccacattggtacttgtccagaatcctgatagaggacctccagacc
cagcagacctggaccttcctgttcagtgactgggtggcggttgacaggggctcggtcagt
ctcaaggtcaccctccagccctgctccctggaggacctcaagtctcaaaccaaccagcag
ttcctgttcaagtcgagccgggacctccgagagtcacacctctggctaagcattgcttca
aagccctcctacagctcctttacccgcgctcagcgactgtcctgtgccctctgcctgctt
ctgatgaccatgctgaccagtctgatgtttcatgggattcccactgatgacccggcagac
caggctcgagtgagctacatcacaatctcgctgtctgatctcgtgattggggtacaaagt
ggactcatcatgttccctgtcaatatactcatcattcagctcttcctaaaagccaagaaa
aagccaaggggcacaactcctgtaagagtaaagaagaagagaaagaaacagaaaaaaaat
tctgtaagtggcattgaagctggtgagggtagcgaaacactagaggaagaggaggaggaa
gagagagaaccagccaaggaggatgggttactgccatggtggacggtctacattgcctgg
acattggtgatctccctttctgtggtctcctcatactttgtcatgttgtacggactaaag
tacggctatcagaagagtgtggactggcttgtctccttcttcactgccttcttccagagc
gctttcattacccagccattcaaggtcatcgccatctccctggtcttcaccatgattctg
aagaaaccagtggtagtgcagggagggaaggccagcacagagaagatgagtgagcagttt
gactctgcagacaagccccagagccgctacgttccagacccactctctcgacgactaatg
aacaggatccgcaaaaagctgaaacttgaagaggagattcacgttaccctgagagacatc
gccctgtacgcgctttttgtgatctgtatccttttcatggcgcacggtcatcggaacgtc
ggcaagtcactgatgatgcgccggtacatggagagcgtgtttattgagcccagacaccct
cccatctactcccaggcctcgggcttctccacggacatcctggaactcaataatattgcc
aatgtagagcttttctggtcatatattaaggagcgcattgttcctgttctcggtgagatg
tcgctaggcaacgctacagcacctggactggtcagcgagtactttctgttgggaaagtac
cgaatacgacaggtcagaatccaagaagacagctgcgactatcctgaatgggtacggagg
aagactatgacattcagcatgaactgttctggcgagtactggatcggcaacgaagactcg
ggggactacaacatgagctggagagagcccctcacctacaaacccaagcggctgtccgac
acctggagtcaccgctcctcctggtcccttaaaactatcccctacgaggggaccctagcc
acatacagtggcggggggtacactgtgctgctggacgggaacgtgagccagtccctgtcc
atgattcaggatctacaggactccagctggatagaccacagaacccgggcagtgtttgtg
gaattcaccacctataatgctaatattaaacttttctgtgttgttatgattccctttgag
ttctccaatcttggagttatataccccagctaccagatattttcaacgaaaaacttcacc
tacagcagccctttggaagtatttactgccctttgtgaaattctgtttgtgatatttgcc
ttggcgttcttttattttgaaatcaaaagattttactacggaggaagagcaaagtatttt
tcagatccttggagttatgtggaaatcattcagatcattatgtctttctctatcgtgggt
ctttacttgaagaagattgtatccgtctcagctaaactgacggacttgcacattacggaa
gaatttgtcagtttttatacctctattttctgggacatgacattgaactacattctggcc
ttttttgtggctttggtgattttgaaattcttcaaatatttgaaattcaacgtcagaatg
tacttcatgtctcagaccctctccatcgccaagaaaaacctgctcggcttcagcctgatg
gtggtgatcatagtggtggccttcgctcacttcgctgtcttcaccttcggccccatcgtg
aagggcttctccaacatgggccagtctctgattaccctgtttcagctggcccttggcgaa
tcggacttctaccccatacagcaggctaaccggtacatggggcccgccttcttcttcctg
tacatatttctggtgcagtggaccgtactagtcatgttcatggccatccttaacctggcc
atcgaggagaccaagagcaacatggcccaaatgaaaaacgatctggaggttgtggattat
atatacaacagaatacaccagatattgcctaaatgtcactga
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integrated database retrieval system
