Magallana gigas (Pacific oyster): 117680504
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Entry
117680504 CDS
T03920
Name
(RefSeq) DNA polymerase delta subunit 3-like isoform X1
KO
K03504
DNA polymerase delta subunit 3
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg03030
DNA replication
crg03410
Base excision repair
crg03420
Nucleotide excision repair
crg03430
Mismatch repair
crg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117680504
03410 Base excision repair
117680504
03420 Nucleotide excision repair
117680504
03430 Mismatch repair
117680504
03440 Homologous recombination
117680504
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crg01009
]
117680504
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crg03032
]
117680504
03400 DNA repair and recombination proteins [BR:
crg03400
]
117680504
Protein phosphatases and associated proteins [BR:
crg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117680504
DNA replication proteins [BR:
crg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
117680504
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
117680504
MMR (mismatch excision repair)
DNA polymerase delta complex
117680504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
117680504
NCBI-ProteinID:
XP_065924552
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All DBs
Position
8:6389986..6400042
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AA seq
441 aa
AA seq
DB search
MATDSMYLENLEEYVNDEGKIVTYKWLSLNLHVHVNEAKQMLYTFVEEQKKKKIHVTATY
FVSGMCKSVDGCQVQTYTCTVIPEEELETFKNSLTTVHSIHVYSVQKAGLKDSNSLYLAD
YDCVKENLFEIHKYRSIKYEKAQPSSEAKRPPIKTAQEETKVSGTSSAASTNGHSSSNTK
KDAKKGGIAGMFANAATKKADASKKADASKKQEIKAETNGTTTAGKADKKNQKDAKKGVA
NFFANHTGKKAAPKTMEVKKEENEEEAEKKKDTKPKQNGKGKRSKQARNGDSDEESNKKK
RRRIRIEMSESSEEEMDYESPVPSPVPSPTREPSPVPDTPEKESPKKQEVSVKPSQNGEK
HRKRRRKLVPKTFMDEDGYMVTEKVWESESTDASDAEPPPVKETPKPSSPQKKKKASPKK
KSPPSTGSKKQTSLSSFFSKK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagattcaatgtatttggagaacttagaggaatacgtaaacgatgaaggaaaa
atcgttacatacaaatggcttagcctgaatctacacgtccatgttaatgaggctaaacaa
atgctttacacatttgtggaagaacagaagaagaagaaaatccatgtaacagcaacttac
tttgtgtcgggaatgtgcaagtctgtggatggatgccaggtacagacatatacatgcaca
gttatccctgaagaggaattggagacttttaaaaactctctgaccactgtccatagtatc
catgtgtacagtgtacaaaaggccggccttaaggactcaaattctctctatttagctgat
tatgattgtgtgaaagagaatttgtttgaaattcacaagtacagatctattaaatatgaa
aaagctcagccatcatcagaagcaaagagaccacccataaagacagctcaggaagaaacc
aaagtctctggaacctcatctgcagcttcaacaaatggtcattcttcttcaaacaccaag
aaagatgctaagaaagggggtattgcaggaatgtttgccaatgcagctactaaaaaggct
gatgctagtaaaaaggctgatgctagtaaaaagcaagaaattaaggctgagactaatggg
accaccactgcaggcaaagctgacaagaaaaatcagaaggatgccaaaaaaggtgttgca
aacttttttgccaatcacacaggtaaaaaggccgcaccaaagaccatggaagttaagaaa
gaggaaaatgaggaagaagctgaaaagaaaaaagatacgaagccaaaacaaaatggcaag
gggaagagatccaaacaggccaggaatggagactcagatgaagaaagtaacaagaaaaag
aggcggaggatcaggattgagatgtcagagagcagtgaggaagaaatggattatgaaagc
cctgtccctagtcctgtccctagtcctacaagggagccctcccctgtccctgacacccca
gagaaagaaagtcccaagaaacaggaagtctctgtcaaaccctctcaaaatggagagaaa
cacagaaaacgcaggagaaagttagttcccaagacttttatggatgaagatggatacatg
gtgaccgaaaaggtttgggaaagtgagtctaccgatgcctccgatgccgagcctccccct
gtgaaggaaacccccaaaccctcatctccgcagaagaagaagaaggcctcaccaaagaag
aagtctcccccctcaacaggcagcaagaaacaaacctcgttatcctctttcttttccaag
aaatag
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