Magallana gigas (Pacific oyster): 117680995
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Entry
117680995 CDS
T03920
Name
(RefSeq) putative nuclease HARBI1 isoform X1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
crg03036
]
117680995
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Gene silencing
Transposable elements
117680995
BRITE hierarchy
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GFIT
Motif
Pfam:
DDE_Tnp_4
DDE_Tnp_1
Plant_tran
HTH_Tnp_4
Motif
Other DBs
NCBI-GeneID:
117680995
NCBI-ProteinID:
XP_034299608
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Position
3:complement(60317965..60320930)
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AA seq
343 aa
AA seq
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MATLLIIQRRERRRLRRERVFLDRNNALESMQDIDLINRYRFPRHVILDIVSKVDEYVAR
PTRRVHAIPTYIQVLVTLRYVAKADFFSEVGDLHSISRSSVCRIIHNVCYAINATIDNID
FPERVCEMRSIKTDFHEIAHIPNCIGAVDGTLIPIKGMTGPEEFAYVCRKNFHALNIQAV
ADANMRFLHINARYPGSTHDAYVLTNSGLPDRVQSLPEGGWLLGDSGYPLRTWLLTPYQS
PSNRREEKFNDSHGKTRVVVERAFGVLKARFRCLHQSGGVLPFSPIKCSRIIEICFRLHN
IALKGKIPLQDRGRVVNYHQNMLFGDNAPVLANQTREQVASLL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccttgctcattatacaaaggcgagagcgaagacgtttaaggagggaaagggtg
tttctagacagaaataatgccttagaaagtatgcaagacatcgacctaatcaacagatat
cgcttcccaagacatgtcattcttgatattgtgtccaaagtagatgaatacgtggcaagg
cccacgcgtagggttcatgctatacctacatacattcaggtacttgtcacactaagatac
gtggctaaagctgactttttctctgaagttggggatttgcacagcatttcgaggtcatct
gtgtgccgtataattcataatgtttgctatgctatcaatgcaaccatagacaacatagac
tttccggaaagggtgtgtgaaatgcgatccatcaaaacggattttcatgaaattgctcac
ataccaaactgcatcggtgctgttgatgggacgctcattccaataaaaggaatgactggc
cccgaggaatttgcgtacgtttgtaggaaaaactttcacgcattaaacatccaagcggta
gctgatgccaacatgagattcctacacatcaatgcccgctaccctggatcaacccacgat
gcatacgtgctcacaaactccggacttcctgatcgagtccagtctcttccagagggtggc
tggttgctcggggactcaggatacccattacgcacgtggttgctgactccctatcagtcc
ccaagcaacaggagggaggagaaattcaatgacagccatggaaaaacaagagtggtggtt
gagagggcatttggcgttttaaaggctaggtttaggtgcttacatcagtctgggggtgtt
cttccattttcgccaattaagtgctccagaataatagaaatatgctttagacttcataac
attgcattgaaaggaaaaattccattacaagacagaggacgagtagtgaattaccaccaa
aacatgttgtttggggacaacgcacctgttctggctaatcagacaagagagcaagttgca
agcttgctttga
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