Magallana gigas (Pacific oyster): 117681365
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Entry
117681365 CDS
T03920
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
117681365
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117681365
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
Motif
Other DBs
NCBI-GeneID:
117681365
NCBI-ProteinID:
XP_034301421
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Position
2:complement(46056815..46059840)
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AA seq
707 aa
AA seq
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MPWCTLVVIFLVYMYMCVRCNSSSAQNSQCPEQFCNCSKRQVSCEKHGHHLPFIPPIPKD
TLVLKFTGNFLPLISQETFRNVTSARLKELVLGGNGIQNITSDAFEVFPRLTFLDLSGNQ
FPVSILRESFYGLRHSSLKKLFLIQMALPDLPLDMFEYLQNVSTLQGISLNYNNISNLVG
SVFSKIRGLRNLGLNNNSITNVDFGGTHLEVVRLRWNKLTTVPRFCDNARKPLAPRLRVL
DLGHNLISQINRHNFCGSCLPRLRNLTLDGNLFHKVPNNTFSDLPSLVRLSIKYLRSFDI
TFETTCFNSSSMRLLYIANHMSMFDSKSRTDYKNIFRYCRGLNVLDMTRIRLTTYDGVML
YELLHHLTNLTKLVLQSTLVLTLPENLFSRMPFLGSLHLDHCYLSQWKLGVFRNVASVKT
LYLDHNEIAIINQTSFPAELLRGLKQLSLGYNPYLCTCDMVWFREWTGNNTKVMLNWPYA
YKCKSPREWATKLFSDFSLSYSYCHPLSPYVIAAISTAAGVVLIVIVVGLFYHYRWHIKY
FFYLMRARKRGYEPLPGGDDDFIYDVFVAYHSDDRVWVISELIPCLERKEKLRLCLHDRD
FEVGKLIVDNITEKINSSRKVLLLLSNNFIQNRWCKFEMAMVHARNVEEDRSDIVVVILE
NIRTQNMSNSLHVLLKTTNFLEWSNKKSAKELFWKRLVASVKPESCQ
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggtgtacattggttgtgattttcttagtatacatgtacatgtgtgttagatgt
aattcttcaagtgcccaaaactcgcaatgtccggaacagttctgtaattgctcaaaacga
caggtatcctgtgaaaaacatggccaccatttaccgtttattccgccgattccaaaagac
acgctagttctcaagttcacgggaaatttcttacccctgatcagtcaagagaccttccga
aatgtgacgtctgctcggctcaaagaattggttcttggtgggaatggcatccaaaacata
acaagtgacgccttcgaggtctttccacggttgaccttcctggaccttagtgggaaccag
tttcctgtctccatactcagggagagtttttatggacttcgccacagcagtctgaagaag
ttattcctcattcagatggcgcttccggacttaccattggacatgttcgagtatttgcaa
aatgtctctacactacaaggaatttcattaaattataataatatatcaaatttagttggg
agtgtgttttcaaagattcgaggacttcgaaaccttggtcttaacaacaattcaattaca
aacgtggacttcggaggcacacatttagaagttgttcgacttcgctggaacaaactaact
acggttccaagattttgtgacaatgcaaggaaaccactagccccaaggctgcgagttctt
gatttaggtcacaaccttatatctcagataaacagacataatttttgcggcagttgtctt
ccacgactccgtaatctcactttagacgggaatttgttccacaaagttcctaacaacacg
ttctccgacctcccctcacttgttcgcctctccataaagtatctgcgctcattcgatata
actttcgaaaccacctgcttcaacagttcatcaatgcgcctgctttacattgctaaccac
atgagtatgtttgattccaaatcaagaacggactacaaaaacatttttcggtactgtcgc
ggactcaatgtgctggacatgacgagaattcgactgactacatacgacggggtgatgctt
tatgagcttctgcaccacttaaccaatctgaccaaactggttctccagagcacgctggtt
ctgacactccccgagaacttattttcaagaatgccttttctgggtagcttgcatcttgac
cactgttatttgagccagtggaagcttggagtttttcgaaacgtggcatcagttaaaacc
ctctatctcgatcacaacgaaattgccatcatcaaccagacttcctttccagcagaactt
ctgcgaggcctgaaacaactgtcgcttggttataacccgtacctgtgtacgtgtgatatg
gtatggttccgagaatggaccgggaacaatacaaaggtcatgttaaactggccttatgca
tacaagtgtaaatctccacgtgaatgggcgacaaaactcttctcggatttttctctgtcc
tactcgtactgtcatccattgagtccctacgtcattgccgcaatatcgacggccgctgga
gtggtcctgattgtgatagtggtgggactgttctaccattaccggtggcacatcaagtat
ttcttctatctcatgcgagccaggaaacgcggctatgaaccgctacccggcggcgatgac
gatttcatttatgacgtattcgttgcgtatcattcggatgaccgagtctgggtaatatcg
gagctgattccatgcttggaaaggaaggagaaactccggctctgtctccacgatagagat
tttgaagttgggaaactgatagttgataacataacggaaaagattaacagcagtcggaaa
gtgctgcttctactctccaataactttatacagaatcggtggtgtaaattcgagatggca
atggtccatgctcgcaatgtggaggaagacagaagtgacattgtagtagtaattctggaa
aacattagaacacaaaacatgtctaactccctccatgttctgttaaaaacaacaaacttc
ttagagtggtcaaacaagaagagtgcaaaggaactgttttggaaaagacttgtagcttcc
gttaaacctgaaagctgtcagtga
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