Magallana gigas (Pacific oyster): 117681451
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Entry
117681451 CDS
T03920
Name
(RefSeq) toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04145
Phagosome
crg04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117681451
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
117681451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
117681451
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
117681451
04090 CD molecules [BR:
crg04090
]
117681451
00536 Glycosaminoglycan binding proteins [BR:
crg00536
]
117681451
Membrane trafficking [BR:
crg04131
]
Endocytosis
Phagocytosis
Toll-like receptors
117681451
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117681451
CD molecules [BR:
crg04090
]
Proteins
117681451
Glycosaminoglycan binding proteins [BR:
crg00536
]
Hyaluronan
Cell surface receptors
117681451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR_2
TIR
LRR_Zer-1
LRR_NXF1-5
LRR_6
Motif
Other DBs
NCBI-GeneID:
117681451
NCBI-ProteinID:
XP_065932290
LinkDB
All DBs
Position
2:32931990..32936092
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AA seq
851 aa
AA seq
DB search
MGIILATFISLLLKMAAFVQADVTCTDDANCLYSYATTLSADCSSRDLAIPPCFNETSGL
ASINLRNNNLDRVPDNMPMNIEFLDLSYNVISDKLIFLQKYKQLQHLNLDNNFIKNDSIQ
RVTKMPNLKFLSLKNNFRTLNAYPDNLLAGFGSLYHLRIDGLPEGNFADMFPNNIHSLKI
LDVSGKDGFCKISRLKTSEFDKFNLTHLYLSQCDLPFIEMGSLASQTHLQYLDVSYNDQL
GFKGLQNIAHDLQDSSIKVLKLNKVHCTFGLGTILLLNHTAYLNKTSLEELYLDSNRLEI
IETGVITYHLPKSLKFLSLGDNKLNNGIYDLEISVLHNLQTINTSFQFFSHANYFENCYD
YRITCHISPEARVAGEFVHNVKDTYPSFMRNNSQSFLPKTKGTTPEFYLPRNLTTVFAND
MKLQYHFGKLNIGQCNVTHLHFQNNFFNKMDGPLHGCNKIIYLDFSNNYCHYISPQAFQI
QTQLEVLNFSRNYLGQSFQDDHSGEILGRNIKLAVLNLHDNKITTLPRHVFIHNPMIKIL
NVSHNRLDTWSVDLRHMSQLQHLDLSYNLISELNKSAIDLFPKHSNFSIVFQGNPISCSC
KNLFFLNWINRDGRSRFSHPANVTCIYRNGSTLSLQNLPDILNILQRDCSSYSVIIILAS
SFICFVTSFIIYRIMYRYRWKILYIYYLVKRIILPKGKKVEQTIFYESDVFISYAEPQRK
FSVNMARKLENKGLKVRIHDRDFLPGIDIAENITNAIHNSKRTVIVMTSHFLKSHWCMFE
LNMARMESIYSRGGENFLLLILLEKSAVKDMPRSLLDIIESKSYLEYPDDDSFQSPDAFW
ANLEEAVNDNE
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcattctcgcgaccttcatttctcttctgctgaagatggctgcgtttgttcaa
gcggatgtgacatgtaccgatgatgccaactgtttgtattcctacgccacaacactgtcc
gcggattgttcatcacgtgatcttgcaattcctccttgcttcaacgaaacttccggctta
gcgtccattaacctgcggaacaacaatttagatcgtgttccagacaatatgccaatgaat
atagagtttcttgacttatcctataatgtaatatcagataagttgattttcttgcagaaa
tacaagcaattgcaacatcttaatctggacaataatttcattaaaaatgattctattcaa
agagtgaccaaaatgccaaacttaaagtttttatccctcaaaaataattttagaacgctg
aatgcatatccagacaacttacttgccgggtttggttcattatatcatctgcgtattgat
ggactcccagaaggaaattttgccgacatgtttccaaacaacatccatagcttgaaaatc
cttgatgtctccgggaaggatggattttgcaaaatctctcgactgaaaacgtccgagttt
gataaattcaatcttacacacttatatttgtctcagtgcgatttaccgtttatagaaatg
gggtctttggcgtctcagacacatttacaatatttagacgtttcgtataacgatcaactt
gggttcaaaggtttacagaacatcgcacatgaccttcaagacagttcaatcaaagtactg
aaacttaacaaggtccactgtactttcggactaggcacgatcttacttctaaaccatacg
gcttacttgaacaaaacctcacttgaagagttgtatttagacagtaacagactagagatt
atagagacgggagttattacatatcacctgcccaagtccttaaaattcttatctttggga
gacaataaactaaataacggcatttatgacttagaaatttctgttttacataatctacag
actatcaatacgagttttcaatttttttcacacgccaactactttgaaaattgctatgat
taccgcattacatgtcatatctcaccagaagcgagagttgccggagaattcgttcacaat
gtaaaagacacttacccttcttttatgcgaaacaattcacaaagtttcttgccgaagact
aagggcaccacaccggaattttatttgcctagaaatttaacaacagtatttgctaacgat
atgaaattgcaataccactttggaaaactgaacattgggcaatgtaatgtgacacatctt
cattttcagaacaatttttttaacaaaatggacggcccactgcacggatgtaacaaaatc
atatatcttgatttttccaacaactattgccattacatttctccacaggccttccaaatt
caaacacaactagaagtgctaaacttttctcgaaattacttaggtcagagttttcaagac
gatcacagcggggaaattttgggacgcaacattaagctggctgtcttgaatttacatgat
aataagataactacattgccacggcatgtttttattcacaacccaatgataaaaattctt
aatgtttcacacaacagactggacacatggagtgttgatcttcgtcacatgtctcaactt
caacatctggatctgtcgtacaacttaatatctgaacttaataagtcggccattgattta
tttcccaagcacagcaatttctctattgtttttcaaggaaatcctatatcttgttcgtgc
aagaaccttttctttttaaattggataaatagggacgggcggtccagatttagccatcct
gcaaatgtaacgtgtatttacagaaatggatcaactttatcacttcaaaacctgccagac
attttgaatattttacagagggattgttcctcctacagcgttatcattatattggcatct
tcattcatttgcttcgttacgagttttataatataccgaatcatgtatcggtaccgatgg
aaaattctttacatttactaccttgtcaagcgtattatattgcctaaaggtaagaaagtc
gagcagacaattttttacgaatccgacgtgtttatatcatatgctgaaccccagagaaaa
ttctcagtgaacatggccagaaagctagaaaacaagggattaaaagtccgcattcacgac
cgtgatttccttccggggatagacatagctgaaaatattacaaacgcaattcacaacagc
aaacgaactgtgattgtcatgacgtcacattttctgaaatctcattggtgcatgtttgag
ttgaacatggcgcgcatggaaagcatatattcccgcggaggagaaaactttcttctatta
attctgttagagaaaagtgctgtcaaagatatgccccggtcccttttggacattatcgag
agtaaatcatacttagagtacccggatgatgatagcttccagagtccagatgcattctgg
gcaaatttggaagaggctgtaaatgacaacgagtga
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