Magallana gigas (Pacific oyster): 117681461
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Entry
117681461 CDS
T03920
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
117681461
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117681461
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GFIT
Motif
Pfam:
LRR_8
TIR_2
LRR_4
TIR
Smim3
Motif
Other DBs
NCBI-GeneID:
117681461
NCBI-ProteinID:
XP_034301991
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Position
2:complement(33720997..33728896)
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AA seq
859 aa
AA seq
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MDIMLTFKFLWVMMTLFIYVRAEEKCTEDAQCLYSYAGKLSADCSSRNLAFPPCFDETSE
LEAINLRHNRLNHVPDNMPKTIEFLDLSYNKIQDNLVYLQNYTRLRHLNLYHNQMDYASF
HRQVTEMPNLQFISLKHNTQLSSYPRYLFAGFGSLHHLRIDGLPDGNFGDMFPNSEVKSL
KILDVSGYDGFCKISRLKASAFAKFNLTHLNLSKCDLLYIETGSLSSQKHLQFLDASNNE
RLGFRGLRIIAHDLQNSTIKVLKLNKVHCTFGLGKILLLNHTTYLNKTSLEELYLDSNRI
EIMETGVITYHLPKSLKYLSLGDNKIDNGIYHLELSVLHNLQTLNASFQLFSHNNFFDGC
YDYRQSCHILPEFAVYPKEFTVYPSAVKSVRNIYPWYQHNAFSGLFPKSPNFTYYLPRSL
TTIFANDMKFQFFVIGQLFFGQCNITHLHFQNNFIYEVYGPSSGCNNLVYFDFSNNYCRH
FTPHLLKIQSQLEVLNFSRNDLGHLFQDDNKSKILGSNLKLAVLSLHDNKITTLPRNLFI
NNSMIKFLNISRNRLDTWRVDLRHMYQLQFLDLSFNLLSELDESAIDLLPTHSEFKISFQ
GNPLSCTCKNLFFLNWINNIHVDRLSHIANTMCIYRNGSTLSLQNLPDILNILQKDCSSY
SVIIILASSFICFVTSFIIYRIMYRYRWKILYIYYLVKRAIFPENKKTEGKRFYESDVFI
SYAAHQRDFSISMARKLENKGLKVRIHDRDFLPGIDIAENITNAIHNSRRTVVVMTSHFL
KSHWCMFELNMARMESIYSRGGENFLLLILLEKNVIKDMPRSLFDIIESKSYLEYPDDDS
FQSPDAFWANLEDAINENE
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggatatcatgttgactttcaaattcctttgggtaatgatgactttatttatttatgtt
cgtgcggaagagaagtgcactgaagatgctcaatgtttgtattcctacgctgggaaactg
tctgcggattgctcgtcacgtaatcttgcatttcctccttgcttcgatgaaacttccgaa
ttagaagccattaatctgcgacataatagattaaatcacgttccagataatatgccaaag
actatagaatttcttgatttatcgtacaataaaatccaagacaatttagtctacttgcag
aactacacgcgactgcgacatctgaacttataccacaatcaaatggattacgcaagcttt
catcgacaagtgaccgaaatgccaaacttacaattcatatctctcaaacataatacgcag
ctttcctcctatccgagatatttatttgcaggatttggttcgttacatcacttgcgtatt
gatgggctacctgatgggaattttggggatatgtttccaaacagcgaagtcaaaagtttg
aaaattcttgatgtctctggatatgatggattttgcaaaatctcgcggttaaaagcgtcg
gcgtttgctaaatttaatttgacacacttaaatttgtctaagtgtgatttgttgtatatt
gagacaggttctttatcgtcgcagaaacatttgcaatttttagacgcttcgaataatgaa
cgacttggattcagaggtttacgaatcatagcacatgatcttcagaacagtacaatcaaa
gtactaaaactcaacaaagttcattgtacgtttggactgggtaagatcttgcttttgaac
catacgacttacttgaacaaaacctcactcgaagagttgtatttagatagtaacagaata
gagattatggagacaggggttattacatatcatcttcctaagtctttaaaatatttgtct
ttaggagacaacaagatagacaacggtatttatcatctagagttatccgtcttgcacaat
ctccagacactcaatgcaagttttcaactcttttcgcacaacaatttctttgatggttgc
tacgattaccgccagtcatgtcatattttaccagagtttgccgtttatccaaaagagttt
acagtttacccgagtgccgttaaaagtgtgaggaatatttacccgtggtatcagcacaat
gctttctctggattattcccaaagtctccgaatttcacatattatttgccaagaagtttg
acaacaatatttgcaaacgacatgaaatttcaatttttcgtaattggacaactgttcttt
gggcaatgcaatattacacatcttcactttcagaacaattttatatatgaggtgtacggt
ccatcatcagggtgtaataacctcgtgtatttcgacttctccaacaattattgtagacat
tttacaccacacttgttaaaaattcaaagccaattagaagtgctaaacttttctcgaaat
gatttgggtcaccttttccaagacgataacaaaagtaaaattttggggagcaacctcaag
ttggctgtcttgagtttacacgataacaaaataactactttgccccgaaatttatttatt
aacaactcaatgataaaatttcttaatatttcacgcaacagactggacacatggcgtgtt
gaccttcgtcacatgtatcagctccaatttctagatctatcgtttaaccttttatctgag
ctcgacgaatccgccattgacttattaccaacccacagtgaattcaaaattagtttccaa
ggaaatcctctgtcatgtacgtgcaaaaacctattttttttgaactggataaacaatatt
catgtggatagattaagtcacatagcaaacacaatgtgtatttacagaaatggatcaact
ttatcacttcaaaacctgccagacattttgaatatattacagaaggattgttcctcatac
agcgttatcattatattggcatcttcattcatttgcttcgttacgagttttataatatac
cgaatcatgtatcggtaccgatggaaaattctttacatttactaccttgtcaagcgggcc
atatttcctgaaaataaaaaaacagagggtaaacgattctacgaatctgacgtgtttata
tcatatgctgcacaccagagagacttctcaataagcatggcaagaaagctagaaaacaag
ggattaaaagtccgcattcacgaccgtgatttccttccggggatagacatagctgaaaat
attacaaacgcaattcacaacagcagacgaactgtggttgtcatgacgtcacattttctg
aaatctcattggtgcatgtttgagttgaatatggcgcgcatggaaagcatatactcccgc
ggaggagaaaactttcttttactaattctgttagagaaaaatgttatcaaagatatgccc
cggtccctttttgacattatcgagagtaaatcatacttagagtacccggatgatgatagc
ttccagagtccagatgcattctgggcaaatttggaagatgcaataaatgagaatgaatga
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