Magallana gigas (Pacific oyster): 117682704
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Entry
117682704 CDS
T03920
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
117682704
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117682704
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GFIT
Motif
Pfam:
TIR
TIR_2
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_EndoS
LRR_6
ThsB_TIR
LRR_9
CAP12-PCTIR_TIR
Motif
Other DBs
NCBI-GeneID:
117682704
NCBI-ProteinID:
XP_034306783
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All DBs
Position
4:7977846..7979252
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AA seq
390 aa
AA seq
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MSNNFCTSVSDYFFQHLNSIVELYLNNNLLGFSLASDREGKIFRYLNTLRHLELKGNKIA
SLPTAVFVNLTNLKYLDLSNNLLTSIDFNISHLKSLTYLNLSSNQIQYLSDSTMDAFDQH
SDQAPITLSFLNNPFLCECKTLKFLHWMDQKENSSKIHMNDFNEYTCKKEGTLIKFVDIQ
QHIKELEKECASYKTLIFLVTSCILLFLFILTTGLVYRYRWRLRYFYYMTKSRYHGYKSV
RGEDEQTDFKYDAFVSYADEDLSFVQQMTSKLEGENGIRLCIHHRDFVPGYDIAENIITA
INKSRKTIVILSPNFIQSDWCMYELHIAKMEEIYNRDNENVLFLICYEEIPAPKIPLSIM
DVIHQKSYLEFPNDEYGNTVFWNKLHATLV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaacttttgcacttctgtgtcagattacttttttcaacatttaaattcaatt
gtcgaattatatttgaacaataatttgttgggatttagtcttgcttcagatagagagggg
aaaatcttcagatatctgaacaccctgagacatttggaactgaaaggaaacaaaattgca
agtctaccgacagctgttttcgtaaatcttacaaatcttaaatatctcgacttgagcaat
aatctgttaacctctattgattttaacattagtcatttgaaatcgttgacctatttgaat
ctatcatccaatcaaatccaatatctatctgattcaacaatggatgctttcgatcagcat
tcggatcaagcacctataacgttaagctttttgaacaatccatttctgtgcgaatgcaaa
actctcaagtttttgcactggatggatcaaaaagagaattctagtaaaattcacatgaac
gattttaatgaatacacatgcaaaaaagaagggacgctcataaaatttgttgacattcaa
caacatatcaaagaactggaaaaggagtgtgcctcttacaaaactctgatatttcttgtg
acatcctgtatcctcctcttcctcttcattctgacgacaggattggtttacaggtacagg
tggagattgcgatatttttactacatgacaaaaagtcgatatcacggatataagtctgtc
cgaggtgaagacgagcaaacggatttcaaatatgatgcatttgtttcgtatgccgatgaa
gatttaagttttgtccagcaaatgacatcgaagttggagggagagaacggtatccgtttg
tgtatccatcaccgtgattttgtccctgggtacgacattgctgagaacataatcaccgcc
atcaacaaaagcaggaaaacgattgttatcttatcaccaaatttcatccaatccgattgg
tgtatgtatgaactacatattgccaaaatggaagagatatataatagggacaatgagaac
gtcttattcctgatttgctacgaggaaattcctgcaccgaagattccgctttccatcatg
gacgtcattcatcaaaagtcgtacctagagtttcccaatgatgagtatggtaacacagtg
ttttggaataaacttcatgcaactcttgtatag
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