Magallana gigas (Pacific oyster): 117684250
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Entry
117684250 CDS
T03920
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crg03021
]
117684250
Transcription machinery [BR:
crg03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
117684250
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
RIF2_lid
Motif
Other DBs
NCBI-GeneID:
117684250
NCBI-ProteinID:
XP_034311420
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Position
LG10:complement(3069369..3138142)
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AA seq
1351 aa
AA seq
DB search
MSQKTIEDTIIDVVRDILHGEAIEAALCSVILHTEESLQWKKEHCFNSLKTALANVPQES
LDTALKCYITQIYNVQNASRVELLLDLLEGLVEYNVVPAKPICDALLDHELLSYNASLMW
TKTFQLMRKIIGGVDYKGCRDLLRGILEKCQGIKEDENVSVMPDIDTPVNLVAHILDRNV
CLLPAYLAVNEINKVCPEDRKWPHWKMGNILADFVHSFRPAAQMVTVSGRTHLLPVVGYS
IAISTSNVWRLSSSCLKFPLNGPLPYDKELSEPQTGLLRYVLEQPYSRDMVCNMLGLNKQ
VKQRCEVLEEQLVDLVVMAMERSENDDASNDECLSQLLWQHLSSQVIYFVLFQFASFPHM
VVSLYEKLKGRNLNKGRDHLMWVLLQFISGSIQKNPLKEFLPVMKLYDLLYPDKGMIPMP
DVTKAQSTHGVAATCIWIHLNKKAQTDTIKPPRPTPHALQEHCEFLKQSLNNKNLSLNDY
KIALLCNAYSTNNDYFNLPMGKLVESIYGDSKHTTLLPGNIVASAPTQPLAMSLLDSLTV
HAKMSLIHSIVHRVIKQAKSKATIAQSPALIETYSRLLVYMEIESLGIKGFISQLLPTVF
THNAWGILHTLLEMFSYRLHHTQPHYRIQLLSHLHHLSQSPQTNQNQLQLCMESTALRLI
TGLGSFEVQPQLSRIFNEPGRPGFLSNESEELNRVLVLTIARAMHVTGVDSFSSTWPREI
LNQIMANTPHNWSPNTLANFPPSLAEFFQAQPQHRDDKNTLKRNVEAEYKKWKTMANEND
IIAHFSMQGSSTVFLCIIWKNLLEENRGITPIAYKVLDRLGPRSVSAHLRTFSDYIVSEL
NLNSAGGQHFHKAIDSLNEMVWRYNIVTIDRLILCLALRNVDEDARLCYLLIHMLLLKPQ
DFKSRVQEFVKENSPEHWLQNNWHEKHMAFHRKYPEKFYFEGIQDLSSPIQHQYLPVYFG
NVCLRFLPVLDILLHRILEQPSLTTNNLNLFEKILESLGVLYKFHDHPITYLYNTLHYYH
KILVQRAAYKRRLVTTIWNAHQEIRPSTWFLTEDYQRFSHEESLEWVPDLDYYVRIIGRL
VDTIDGKSPFPNCDWRFNEFPGPAAHALYVTCVELMALPVPGNVVGNSLLDVVMKSSTQL
QRGKVMSWMNAVGLVLTALPETYWISLNNKIVETICSLPLTVQGGCQPFQVFNFTTSQTV
FAEQHMTYLLALSHAVWHHAGIGQLSQLSVFLRDHLKPVVKTEEQFLYVCHLVGPFLQRL
HSERTRSLMELVVELYEILVNVDKSCDHLRYLDPITDFLYHIKYMFVGDSVKNEIEKIIR
NFRQALTLRLRFISHINLEEAMTPLAPPMST
NT seq
4056 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaagacgattgaggacacaattatagacgtcgtgagggatattttacacggc
gaggcaattgaggcagccctgtgttctgtaatcttgcacacagaggagtctctacaatgg
aagaaagaacactgcttcaacagcctcaaaactgccctggccaatgttccccaggaaagc
ttggacactgcgctgaagtgttacatcacacagatctacaacgttcagaacgccagccgg
gtggagctccttctggacctgttggaggggctggtggagtacaatgtagtccctgcaaag
cctatttgtgatgctctattggaccatgagctgctcagctacaacgccagcctgatgtgg
accaagacgtttcagctgatgaggaaaatcatcggcggtgtggactacaagggctgtaga
gatttacttcggggcatcctggagaaatgtcaggggataaaggaagatgagaatgtgtcc
gtcatgccagatattgacaccccagtcaatttggtggcccacatcttggatcgtaatgtt
tgcttgttaccagcatatcttgcagtgaatgaaatcaacaaagtctgtcctgaggacagg
aagtggcctcactggaagatgggcaacatcctggctgactttgttcacagttttcgcccc
gctgcccagatggtcactgtttcaggtcgcactcatctcttaccagtggttggatactct
atcgctatctcgaccagtaacgtgtggcgactcagctcatcctgtctcaagttccccctc
aacgggccccttccttatgacaaggaactgtcagaaccccagaccggactattgcgctat
gttctggaacagccctactccagggatatggtctgtaacatgctgggactcaataaacag
gtgaaacaaaggtgtgaggtgttagaggagcagttggtggacctggttgtcatggcgatg
gagaggtccgagaatgatgacgcctccaacgatgaatgcctcagtcagttgttatggcag
catttatccagccaagtgatttactttgtgttatttcagtttgccagttttcctcacatg
gttgtgtccctttatgagaagctgaagggccgtaacctgaacaaagggcgagaccatttg
atgtgggtccttctacagtttatatcgggcagcattcaaaagaacccgctgaaggagttt
ctgcctgtgatgaagctgtatgacctgctgtatcctgacaaggggatgatcccaatgccg
gacgtcaccaaggcccagtcgacccatggcgtggctgccacctgtatctggatccacctc
aataagaaggcccagacggacaccatcaaaccgcctcgccccaccccgcacgccctacag
gaacactgcgagtttctgaagcagagtttgaataacaagaatctgtcactgaatgactac
aagatagctctcctgtgtaacgcctacagcacaaacaatgactacttcaacctgccaatg
gggaaactggtggagagtatctatggcgatagtaaacacacaacattgttgccaggcaac
atagtggcctctgctccgactcagcctctagccatgagcctcctagattccctgacagtt
cacgccaaaatgagtttaatacacagtatagttcaccgtgttatcaagcaggccaaatct
aaggccaccatagcacaatctccggccctgatagagacgtacagccgactgcttgtttac
atggagattgaatctctggggataaaaggattcatcagtcagttactgcccactgtgttc
acacacaatgcctggggcatcctccacacactgctggagatgttcagctaccgcctgcac
cacacacagccccactaccgcatacagctgctgagccacctacaccacctaagtcagtcc
ccgcagaccaatcagaaccagctacaactctgtatggagagcacagccctcaggttgatc
acgggactcgggagttttgaggttcaaccccagctgtcccggatattcaatgaaccaggg
aggccggggttcttgtccaatgagtcggaggaactgaacagggtgctggttctcaccata
gcccgggccatgcacgttacaggtgtagacagtttttcctccacctggccgagagagatt
ctgaatcaaatcatggctaacacgccccacaactggtcccccaacacactggccaacttc
cccccgagtctggccgagtttttccaggcccagccccagcaccgagacgataaaaacaca
ctcaaacgcaatgtggaggccgagtataaaaagtggaaaaccatggccaatgagaatgac
atcatagctcacttctccatgcagggctcctccactgtgttcctgtgtattatatggaag
aatttgctggaagagaatagaggaataacccccatagcatacaaggttttggatcgcttg
ggacctcggtctgtctcggcacatttacggacgttttctgattacattgtctcagaactc
aatctgaattctgctggaggacagcatttccataaggctattgactcgttgaatgagatg
gtatggcggtacaacattgtgactattgaccggctcattctgtgtctggccctgaggaat
gtggatgaggatgccaggctgtgctacctcctgatccacatgctactcctgaagccccag
gacttcaagtcccgcgtacaggaatttgtcaaggagaattcccctgagcactggcttcaa
aacaactggcatgaaaaacacatggctttccaccggaaatacccagagaagttttacttt
gagggtatccaggacctgagcagtcccattcagcaccagtacctgcctgtctacttcggg
aatgtctgtctccgatttctgcctgtattagacatcttgttacacagaatcctggagcag
ccctccctgacaaccaacaacctgaacctgtttgagaaaattctggaaagtctgggagtt
ctgtacaaattccacgatcaccctatcacctacctatacaacacactacactactaccac
aagatcctggtccagagagccgcctacaaacgcaggcttgtcaccaccatctggaatgcc
catcaggagatccggcccagcacctggttcctgacagaggactaccaaaggttctcccac
gaagagagtctggagtgggttccagatctggattactacgtccggatcattggcagactg
gttgacactattgacggaaagagtcccttccctaactgtgactggagattcaatgagttc
ccgggacctgctgcccacgccctctatgtgacctgtgtggaactgatggcacttcctgtc
cccgggaacgtggtggggaattccctgctggatgtcgtcatgaagagttccactcaacta
cagaggggcaaggtcatgtcatggatgaacgctgtaggactggtgctcacagctctgcca
gagacctactggatctctttgaacaacaagatcgtggagacgatttgtagtctgcctctg
acagtccagggcgggtgtcagccgttccaggtgttcaacttcaccaccagccagacagtg
tttgccgagcaacacatgacctacttactggccctatctcacgcagtgtggcaccatgca
ggaataggacagctatctcagctcagtgtattcctccgggaccacctgaagccagtggtg
aagacagaggaacagttcctgtacgtgtgccacctggtggggccgttcctacagaggctc
cactccgagcgcactcgcagtctgatggagttggttgtggagctttacgagattctggtc
aacgtggacaagtcatgtgaccatctccggtaccttgacccaattacagacttcctatac
cacatcaagtacatgtttgtgggggacagtgtgaagaatgagattgagaagattatccgc
aacttccggcaggccctgaccttacgtctgagatttatctcccacatcaacctggaggaa
gccatgaccccactggccccgcccatgtctacctga
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