Magallana gigas (Pacific oyster): 117684281
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Entry
117684281 CDS
T03920
Name
(RefSeq) vesicle-associated membrane protein 3
KO
K13504
vesicle-associated membrane protein 2
Organism
crg
Magallana gigas (Pacific oyster)
Pathway
crg04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117684281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crg04131
]
117684281
Membrane trafficking [BR:
crg04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
117684281
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
117684281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Mod_r
CENPU
LIP-1
PTHB1_hp
Laminin_II
Tweety
DUF3887
DUF4763
Sec20
DUF1056
HH_RND_rel
ASL_C
DUF5676
DUF2529
DUF4559
DUF3040
Mobilization_B
DUF5345
DUF5435
Wbp11
Motif
Other DBs
NCBI-GeneID:
117684281
NCBI-ProteinID:
XP_034311594
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All DBs
Position
7:1782876..1784225
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AA seq
106 aa
AA seq
DB search
MDEDTDEVQTGAHNLQQIQRQIHELVDVLDSNVQLLMNRHGNVEELEKLAEQLKEKAGEF
QVITRRMKYKQVVRNNRWALSIGLVVLVVVLILAGVIISVVYNDRN
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggacactgacgaggtacagactggggcccataaccttcaacagatccagcga
cagatccacgagctggtggatgtactggacagtaacgtacagttgttgatgaatcgccac
ggcaatgtagaggaactggagaaactggcagagcagctgaaggagaaggccggtgaattt
caagttatcacaaggagaatgaaatacaagcaagtggtccggaacaataggtgggccctg
agtattgggctggtggtgctggtggtggtgctcatattggccggtgtcatcatctcggtg
gtgtataacgatcgtaattaa
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