Crassostrea gigas (Pacific oyster): 117684366
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Entry
117684366 CDS
T03920
Name
(RefSeq) double-strand break repair protein MRE11-like
KO
K10865
double-strand break repair protein MRE11
Organism
crg
Crassostrea gigas (Pacific oyster)
Pathway
crg03440
Homologous recombination
crg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117684366
03450 Non-homologous end-joining
117684366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crg03032
]
117684366
03400 DNA repair and recombination proteins [BR:
crg03400
]
117684366
DNA replication proteins [BR:
crg03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
117684366
DNA repair and recombination proteins [BR:
crg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
117684366
BRCA1-C complex
117684366
NHEJ (non-homologous end-joining)
MRX complex
117684366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Mre11_DNA_bind
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
117684366
NCBI-ProteinID:
XP_034312031
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All DBs
Position
LG10:27570454..27573316
Genome browser
AA seq
375 aa
AA seq
DB search
MPEESSEDVFKIIVATDIHLGYGEKDVIRGNDSLVTFEEILENAKKHEADFILLGGDLFH
ENKPPRRIMHGCISLLRKFCFGDKPILFEYLSDQSADFKHCQFPTLNYEDTNLNVSIPVF
SIHGNHDDPSGQGNLCSLDLLHSAGLMNYFGKTTSLEKIEMSPLLMQKGSTKLALYGLGS
VRDERLHRLFVHKNVTMLRPKENQEDWFNVFVIHQNRAKHSTTSYIPEQFLDDFLDLVIW
GHEHECRLEPEWNSSQNFFVSQPGSSVATSLSEGETVKKHIGLLQIKGKNFKITKIPLTT
VRQFYMENVVLSETELDPNDLDIGKKVEAYCSEKVEAILQKAGRMKLLNTGRNKSFDKYL
IICLMYTLYTRVVPK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaatcatcagaagatgtttttaagatcattgttgccacagacatacatctt
ggatatggtgaaaaagacgtcatcagagggaatgattctttagtcacttttgaagaaatc
ctggaaaatgccaagaaacatgaggctgactttattctactgggtggagacctcttccat
gagaacaaaccacctcgcagaatcatgcatggatgcatatcattgctcagaaagttctgt
tttggtgacaaaccaattttgtttgaatacttgagtgaccaatctgctgattttaaacat
tgtcaattcccaactttaaactatgaagacactaacctgaatgtttcgattcctgtgttt
tctatacacggaaaccatgacgacccttcaggtcaaggaaatttgtgttcgttggatctt
ctccacagtgcaggcttgatgaactattttggcaaaacaacaagcttagaaaaaatcgaa
atgtcccctcttctaatgcagaagggaagcacaaaactagccctgtatggattaggatcg
gtgagggacgaacgtctgcatcgtctttttgttcacaaaaacgtaacaatgctgagacca
aaagaaaaccaggaggattggttcaatgtgtttgtcattcatcagaatcgtgccaaacac
tccaccactagctatattccggagcagtttctagacgatttcctagaccttgtcatatgg
ggacacgaacatgaatgtcgactcgaacctgaatggaacagttcacagaattttttcgtt
agccagcccggtagcagtgtagcgacttcactcagtgagggagaaacagtcaagaagcac
attggcctgctacagatcaagggcaaaaatttcaaaatcactaagattcctttgaccact
gtcagacagttttacatggaaaatgtggtgctcagtgaaacggaactggatccaaatgat
cttgacattggtaaaaaagtggaagcctattgctccgagaaagtggaagctattttacaa
aaagcaggtaggatgaagttgttaaatactggtaggaataaaagctttgataaatattta
atcatatgtcttatgtacacactgtatacaagggttgtcccaaaatag
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