Magallana gigas (Pacific oyster): 117685235
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Entry
117685235 CDS
T03920
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
117685235
04121 Ubiquitin system [BR:
crg04121
]
117685235
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
117685235
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117685235
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
Motif
Other DBs
NCBI-GeneID:
117685235
NCBI-ProteinID:
XP_034315442
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Position
7:complement(12935405..12938746)
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AA seq
546 aa
AA seq
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MIGKVLPTSTVYSTHFITLAKELDPRYTPPTKHGILKLMNEKKIKMTEKVARDLPPKSGS
IAITHDDWSSCATESYSTVTAHFITSAWELRSVVLHTHQVQGSHTSEKIADGLKETVATW
NLPDPTCVTDNAANEKKTVEILGWERSGCYGHRINLIVKHALEVPEVHKILSKCRKLVGH
FHKSTSLNDCLIEKQASVFSDNEKLIRHKLIVDCPTRWNSSLDMLKRVLEQTPAIMAVAN
DKKINKNMLDNVKACCLSFEELTVVEDLVQILEPFQKATCILCAELNPTMCKVLVTFEKI
KKILDNPNFSSVIQKVVSKMKVEICKRITDEEIPLMAAMLSPDTKNLSFLSEAERISAHQ
LLLQKALAVSNVNLNIKKENIETVADGHRGTSSDVLPKLPSLDSECVVQQGNVACADDEM
LDDGVSSAKKMKCSDLEDWFDDVFIVHEDRVSLSVAVEKEVTSFLGSTKCVEDRDTTLLQ
WWQKNEFIFPRLATLARKYLAIPASSVPSERVFSLCGNLITKKRSRMRPSQVNTIVFLKM
NMDLYW
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgataggaaaagtgcttcctacaagcacagtttacagtacgcatttcatcacattggca
aaagaattggaccccagatatacacccccaactaaacatggaattttaaagttaatgaat
gaaaagaaaatcaaaatgacagaaaaagttgctagggatcttccaccaaaaagtggatct
attgcaataacgcacgatgactggagtagttgtgcaacagaaagttatagcacagtgact
gcacatttcattacaagtgcctgggagctgcgatcagttgtcctgcatacacatcaagtt
cagggatcccataccagtgaaaagattgcggatggacttaaagaaaccgttgcaacatgg
aacctaccagacccaacatgtgtcacagataatgcagcgaatgaaaaaaaaactgtcgaa
attcttggatgggaacgctcaggctgttatggacatcgcattaatttgattgtaaagcat
gcccttgaagttcctgaagtacacaaaatattatctaaatgtagaaaattagttggacat
tttcacaaatcaactagtttgaatgattgtttgattgagaaacaggcaagcgttttttca
gacaatgagaaactgattaggcacaaactgattgttgactgtcccactcggtggaacagt
tctttggacatgttgaagcgtgtattagaacaaacccctgccatcatggctgtagctaat
gataaaaagattaacaaaaacatgttagacaatgtaaaagcttgttgtttgagttttgaa
gaattgacagttgttgaagatttagttcagatacttgaaccatttcaaaaagccacatgt
attttatgtgctgaacttaacccaacaatgtgcaaggttctagtgacctttgagaaaatc
aagaaaattcttgataatccaaattttagtagcgttattcagaaggttgtttctaaaatg
aaggtggagatatgtaaaagaataacggatgaggaaatcccacttatggctgccatgctc
agtcctgatactaagaacctcagttttttgtcagaggcagaaagaatttctgcacatcaa
cttcttcttcaaaaagctttggctgtttcaaatgtaaatcttaatatcaaaaaagaaaat
atagaaacagttgcagatggccatagagggacttcatctgatgttcttcccaagcttcct
agtttggatagtgaatgtgtagttcagcaaggtaatgttgcctgtgcagatgatgaaatg
ttagatgatggggtgtcttcagctaaaaaaatgaaatgttcagacttggaagattggttc
gatgatgtttttattgttcatgaagatagagtttcattgtcagtggctgtggagaaagag
gttacttcatttttgggaagtactaaatgtgttgaagatcgggacaccacattattacag
tggtggcagaaaaatgaatttatttttcctagattagctactcttgcaagaaaatacttg
gctattcctgcctcctctgtgcccagtgaaagggtatttagcctgtgcggaaatctaatt
acaaaaaagaggtctagaatgagaccatcacaagtgaacacaatagtgtttttaaaaatg
aacatggatttatactggtga
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