Magallana gigas (Pacific oyster): 117690865
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Entry
117690865 CDS
T03920
Name
(RefSeq) E3 SUMO-protein ligase ZBED1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
117690865
04121 Ubiquitin system [BR:
crg04121
]
117690865
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
117690865
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
117690865
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
DUF659
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
117690865
NCBI-ProteinID:
XP_034331549
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All DBs
Position
4:19101588..19104295
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AA seq
667 aa
AA seq
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MASEDYIKLTKPLGSKSGVWETFGLPVYENNGARSTDKSKVVCKLCNAHLKYNGNTTNMQ
KHIDRHHMSVSSSSRSVTSDTDSEAEKVKIDASQRRTVSGQLRLTELNSTKYSFDSQKAK
TLNRKVGVFIAKDLRPLSIVDNLHFREFVRELDPRYSLPTRKYFSEKVIPQLYSEVKDKI
IAELKETESVALTTDSWTSRACESYVTITVHFMQSDWNMKSYVLQTRHLDVSHTGVNIGN
VLKEALTEWKLPTEHEVALVTDNASNMEIAAKTADLQPHIGCFAHTVNLACQRGLKVSAL
GRLLGRIRKVVSYFHRSTTATAVLKSKQQQLSLPIHKLVQDVQTRWNSSYEMIQRYLEQE
PAIHAALSSPEIKKNIRDVVTLSCDDISEAEHVLKVLEPLKTVTNIMCAEHSPTVSLIYP
MKAVILENMAENVQDSNLVREVKQAIRENLSKRYTEEDTAEFLLLCAALDPRFKCLPRLE
QNEKDEVYGNIERKVLLLGDGPVKVKIEPLEPGTETTDAQALPSFLNNNLPDFPTLNQSE
DAPAECDLECPPPAKKIKKSAIEQLLGDVYIVSATPGKTMAQRVKSELENFKKQSSIPLN
ANPLLWWKTNESHFPLLARLAKNLLGIPSTSVPSERVFSTAGDIVTATRSALSAENVDRL
IFLKKNL
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggaagattacatcaagttaacaaaaccgttaggcagtaaatctggagtatgg
gagacgtttgggttgcccgtttatgaaaataacggggcacgcagtacagataaatcaaag
gttgtgtgtaaattgtgtaatgcgcatttaaagtacaatggaaacactacgaatatgcag
aaacacatcgacagacaccacatgtctgtttcatcttcatctcgttccgttactagcgat
actgatagtgaggcagagaaagtgaagatcgatgcgtcacagcgacgaacagtaagtgga
caattacgtcttacagaattaaattccacaaagtattcattcgactctcagaaggcaaaa
acgttgaacagaaaagttggagtgtttattgctaaagatttgaggccactgtctatcgtc
gataacttgcattttcgtgagttcgtcagagagttggacccaagatactctttacctaca
agaaaatacttttcagagaaagttatccctcaattgtatagcgaagtaaaagacaaaata
attgctgaactcaaagaaacagagtctgttgcattaaccactgattcatggacctccaga
gcatgtgaaagttatgtcacgattactgtgcattttatgcagtctgattggaatatgaag
tcctatgtactgcagacaagacatttagatgtctcccacactggagtgaacataggcaat
gtactgaaagaagcactcacagaatggaaattgccaacagaacatgaagtagcactagtg
acagacaatgcatccaacatggaaattgcagccaaaacagctgatctacagcctcacata
ggctgttttgctcacacagttaatttggcatgtcaaaggggactgaaagtttctgcactg
ggcaggctgcttggcaggatacgtaaagttgtaagctattttcatcgctctacgacagca
actgctgtgcttaaatcaaagcaacaacagctgagtttacccattcacaaattagtccag
gatgtccagacaagatggaatagcagctacgagatgattcagagatatcttgaacaggaa
ccagcaatccatgcagctctctcttctccagaaataaaaaagaacattcgagatgtagtc
accctgtcatgtgatgacatatctgaagctgaacatgtcttgaaagtcttggaaccatta
aaaactgtcactaatatcatgtgtgcagagcattcacccacagtctctttaatttatcca
atgaaagcagttattctagaaaatatggcagaaaatgtgcaggattcaaatcttgtgaga
gaggtgaaacaagccataagagaaaatctatcaaagcgatacacggaagaagacacagca
gaatttttattgctttgtgcagcgttagatcctcgcttcaaatgtcttcctagacttgaa
caaaatgagaaagatgaagtttatggaaacattgagagaaaagtacttctcctaggagat
gggcctgtgaaagtcaagattgaaccactagagccaggtacagaaactacagacgctcag
gcattgccctcttttctgaacaacaatttaccagatttcccaacactgaatcagagtgaa
gatgctccggctgaatgtgatctagagtgtccaccaccagcaaagaaaattaagaaatca
gcaatagaacagcttcttggagatgtgtatattgtttctgccacccctggaaaaacaatg
gcacagagagtaaaatcagaacttgaaaactttaagaaacaatcctccatccctttaaat
gcaaatcccctattgtggtggaagacaaatgaatcccactttccactactggctaggctg
gctaaaaacctactaggaattccatcaaccagtgtgccaagtgaaagggtattcagcaca
gcgggggacatagtcactgccacaaggagtgcactgagtgctgaaaatgttgataggctc
atttttctaaaaaagaacctgtaa
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