Magallana gigas (Pacific oyster): 117691332
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Entry
117691332 CDS
T03920
Name
(RefSeq) LOW QUALITY PROTEIN: probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
117691332
Enzymes [BR:
crg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117691332
Ubiquitin system [BR:
crg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
117691332
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
117691332
NCBI-ProteinID:
XP_065928544
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Position
9:35859260..35874128
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AA seq
666 aa
AA seq
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MSKGLKGTLQMMYNEMPRGDTAISNRQLLMRELHIEKLMKRNKPQDSDSMSSSQPTRNND
ASNLINPAVDRPTSSSYGSGGNSRTGVRNGSQDLVIDDNVEXETLLGSGKAGLMDREDPK
DSFPTPQRLQGRPISAKKKGMSGPITSNLEDTGRNRKLNKPRPLTSGSRKIILDSPELTS
EPRRSSVNEDRLSGTTGSVVGRDRKPSIQDVLAVEDTKPSKPKSASGRRQASVEEDFPEY
SVDKSSIANRPPTRGSQRPSSNHSVASKLSTKVGDLEFGDCDDLDSDLADLDLGPKLSVN
RPVQNLIDARPITLQTAINLKTLIFGSATQCFNDEWRYQSLVFCDLPKLQYGIVQKKGGP
CGVLAAIQACVLQELLFGDCKIPLKRFGDPTHEERSQALATALAKIFWRAGENKTAVVTI
GSGKAVFQGGAPKYRADDLTETLMLNHFKSYEDLLDFLKQNVHHFMTDGTGGVILTLYSV
IFSRYIDQVREDMDEPTGKLMGAHGYCTQDMVNLYLTGKTNSNVFNDKIELDSGTGSDVT
ILKGVTGRSNIGLLSLFEHYKSCQVGTYLNTPKYPIWVVCSESHFSVLFSIKKELISDWK
AERRFDLYYYDGLARQQEEIKLTIDTVDMGFKTPSSEEDLVPPLEHCIRTKWSGANVDWN
GTEPLL
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaggtctgaagggaacgctacagatgatgtacaatgaaatgccaaggggagac
actgccattagtaacagacaactgctgatgagagagctacatattgagaagctgatgaag
agaaacaagccccaggattctgactccatgtcttcctctcagccaacccgcaataacgat
gcatctaacttaataaacccagctgttgatagacctacctcttctagttatggctcagga
ggaaactcaagaacaggtgtacggaatgggtcgcaggatctggtcatagatgacaatgtg
gagngggagacactcttggggtcaggcaaggctggcctgatggacagggaggaccccaag
gattcattccctaccccacagagactccaaggcagaccaatcagtgccaagaagaaagga
atgtctggaccaattacaagtaatctggaggacactggaagaaaccgcaaactaaacaaa
cctagacctttgacctcagggtcccgcaaaataattctagacagccccgaattgacctct
gaacctagacgcagttcagtgaatgaggacagactttctggcacaacaggaagtgtagtg
ggccgtgacaggaagccgtccattcaggatgtgctggctgtggaagacaccaaaccttca
aaaccaaaatcagcgtcagggagacgccaggcctccgtggaggaggatttcccagaatac
agtgtggacaaatcgagtatagcaaacagacccccaaccagggggagccagagaccatcc
tccaaccattcagtggcatcaaaactttccacgaaagtaggtgacctggagtttggtgat
tgtgacgaccttgactcagatttagctgaccttgacctgggaccaaagttatccgtaaac
cgtccagtacagaacctgattgatgcccgcccaataacactacagactgccataaatttg
aagaccctgatatttggatcggctacccagtgtttcaatgatgagtggaggtaccaaagt
ctggtgttctgtgatctcccaaagcttcagtacggaatagtccagaaaaagggaggcccc
tgtggtgtgctggctgctatacaggcttgtgttttacaggaactgttgtttggggattgc
aaaataccattgaaacgattcggggatccaacgcatgaagagagaagtcaagccctagct
acagctttggccaaaatcttctggcgagcaggagagaataaaacagcagtagtcaccata
ggttcagggaaagctgtgtttcagggaggggcaccaaagtaccgggcagatgatctgaca
gagactctgatgctaaatcacttcaagtcttatgaagatctgctggactttttgaaacag
aatgtacatcatttcatgacagacgggacggggggcgtgatattgacactgtactccgtc
atcttctctcgatacattgaccaggtgagggaggatatggacgaaccaacaggaaagctg
atgggagctcatgggtactgtactcaggatatggtcaatttgtacttaactgggaaaacc
aattctaatgtgttcaatgacaaaatcgagctggactcaggtacaggaagtgatgtcaca
atccttaagggggtcacagggaggtcaaatataggactgctttcactgtttgaacattac
aaatcctgtcaggtggggacctatttaaacacaccaaagtaccctatttgggtggtatgc
agcgagagtcacttcagcgttttattctccatcaagaaggagcttatcagtgactggaag
gccgagaggcgatttgatctgtattactacgacggcttagctcgacagcaggaggaaatc
aaactcaccatagatacggtagatatgggattcaaaacgccatcttctgaagaggaccta
gttcctccactcgaacactgtatcagaaccaaatggtctggagctaatgttgactggaat
gggactgaacctcttctataa
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