Magallana gigas (Pacific oyster): 117691758
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Entry
117691758 CDS
T03920
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
117691758
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
117691758
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR_2
TIR
LRRNT
DUF5814
Motif
Other DBs
NCBI-GeneID:
117691758
NCBI-ProteinID:
XP_065926627
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Position
9:complement(19872166..19875612)
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AA seq
882 aa
AA seq
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MVITTYLYSLSAHIRMAIFSVSLQIALHLLVITNATLIKKGWDTCHFGSVECECQNAPDN
LLKVDCSRRQLVKIPSLYSNVTWIDLSNNHIDNISVGFPKIVGYIDLSGNRIHHLDRKPF
RGLYNLKSLNLEKNRINISLMYKGLFADLHSLTKLNLKGNIQDQFKRTIIKDDVFSELIS
LQSLKIDGPTNVTFGKGFASLSRLQKLDLSGITGNCSFKRISQNMFLHMPRLIYVDVSAC
DILDIEEGAFGKLQYLKHLDVSHNKQLGFASLPNITHNLNNTSIKSLRGNEMNCLSGIGT
KILKRHFENLKHTNISEIYFEKNRLEQLEPGALRLLPNKIDIISFGENKLTQGRYMIDFF
FFRNIRVLNISVQLRPPPYPESIFETCTEKTDNFDSALKELHTPKECVKEYQASLNSFIY
KSWWHGKIIGTIIVPKTLEVIYANMSRFYGIAPEFGINATGLREIYVQDNFFYSWNGPIY
GVENIEIADVSNNYCSYISKSIMKYAIGLRILKASKNNIGKSLATDAEGEIFENTVFLEF
LDLSYNNIFYLSASMFKNMQKLRTLNLQNNQLSSWRVKVDHMKNMKYINLKQNKLTAFDK
ISRVSFGNLFQLTNLTIDLSENQLLCSCDSKEFLEWITHHRKHFINFEYYECSSSSSHEF
NFSDPDVSAMLLSKSCIYQTIYIVSSIAAAFLSSIIIGITLVKNKWKIRYVVYKFKQRFR
KHKGYFTNFQSGTPCYEYDAMISYSPKELSFVLTDVIPRLENEAGFKLYVKDRDEPVGTP
FGETIMEAIQNSRRVECLVTKSYLKSNLQDYELNMSRMEAIEDRGNLNCVHLILFPDVCN
VSISIQTLDLVRQECFTEYPEEQCALDDFWERLRSIISKEFL
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggtaattacaacgtatttatactctttgtctgcacatatcaggatggctattttcagc
gtaagtctccaaatagctttgcatttacttgtgataacaaatgcaactcttattaagaaa
ggctgggacacctgtcattttggatccgttgagtgtgagtgccagaatgctcctgataat
ctactgaaagtcgattgttccagacggcaactggtaaagattccttcgttgtattcaaat
gtgacgtggatagacctcagtaataatcatatcgacaacataagcgttggattcccaaag
atagttggctacatcgatttatctggaaataggattcatcatcttgatagaaaacctttc
cgtggtttatataatctaaaatcattgaatttagagaaaaatcggataaatatatcattg
atgtacaaaggcctttttgccgatttgcattctctcactaaactgaatttgaaaggaaat
atacaagatcaatttaaaagaacgataataaaagatgacgttttttcagaattaatatca
ttacaatctctaaaaattgatggaccgactaatgtgacttttggaaaaggatttgcaagc
ctatcaagattgcaaaaattagatttatccggcataactggaaattgcagtttcaaaaga
atatcacaaaacatgtttcttcatatgccacggctcatctacgtggatgtgtctgcttgt
gatattttggatattgaagaaggcgcatttggaaagctccaatatctcaaacaccttgat
gtttctcataacaaacaactcggatttgcatcacttccaaatataactcataatctaaat
aatacctccataaaatcgttacgtggtaatgaaatgaattgtttgtcgggaatcggtacg
aagattctgaaacgtcattttgagaacttgaaacacacaaacatttccgaaatctacttt
gaaaagaatagactggagcaacttgagccgggggcacttcgactgttgccaaacaaaata
gatatcatttcgtttggagaaaataaacttactcaaggaaggtatatgatagattttttc
ttttttcgtaatattcgagtcttgaatatcagtgtacagcttcgtccacctccttatcct
gaatcaattttcgaaacgtgcacggagaaaacagataactttgactcagcgctcaaggaa
ttgcatacgccaaaggaatgtgtaaaagaatatcaggcctctcttaacagttttatttat
aaaagttggtggcatggtaaaataattggcacaataattgttccaaaaactctagaagtc
atatatgcaaatatgagtcggttttatggaattgctcctgaatttggaattaatgcaact
ggtttaagagaaatttacgtacaagacaatttcttctattcatggaatggacctatttat
ggagttgaaaacatagaaatagctgacgtgtcaaataactattgctcttatatttcgaaa
tcgataatgaagtatgcaataggattgcggatccttaaggcgtctaaaaataatattgga
aagagtctagcaaccgatgctgagggagagatattcgagaacactgtgttcctagagttt
cttgatctctcatacaataacatattttatctttcagcgtctatgtttaagaacatgcaa
aaactccgaacattaaatttacaaaacaatcaactttcgtcatggcgtgtgaaagtggat
catatgaaaaatatgaaatacataaacctaaaacaaaataaactaacagcttttgataaa
atatccagagtctcatttggtaatctattccaactaacaaatcttactatcgatttgtcg
gaaaatcaacttctgtgttcctgtgacagtaaagaatttcttgagtggattacacatcat
agaaaacattttataaactttgaatactatgagtgttcctcgtcaagttcacatgaattc
aatttctcggatcctgacgtttcagctatgttgctgagtaaaagctgtatatatcaaaca
atatatattgtaagttccatagcagcagcctttctatctagtatcatcataggtattact
cttgtgaaaaataagtggaagattcgatacgtggtatataaatttaaacaacgttttaga
aaacataagggttatttcaccaacttccaatcgggaacgccgtgttatgaatatgatgca
atgatttcatattctccaaaagaattatcattcgttctaaccgacgtaattcctagactt
gaaaacgaggccggttttaaattgtatgtcaaggaccgagatgaaccggtaggaacgcct
tttggagaaaccattatggaagctattcaaaatagcagaagagttgaatgtcttgtgacg
aaaagttatttgaaatcaaatttacaggactatgaattaaacatgtcaagaatggaagct
atcgaggacaggggaaacttaaattgtgtccacttaattctttttcctgatgtttgcaat
gtgtcgatttctattcaaactttagatctcgtaaggcaggagtgttttacggaatatcca
gaggaacaatgtgccttggatgatttctgggagagattaagatcaatcatttcaaaagaa
tttctttga
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