Magallana gigas (Pacific oyster): 136270237
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Entry
136270237 CDS
T03920
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crg04121
]
136270237
03036 Chromosome and associated proteins [BR:
crg03036
]
136270237
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
crg03037
]
136270237
Enzymes [BR:
crg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136270237
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136270237
UBL E3 ligases
136270237
Chromosome and associated proteins [BR:
crg03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
136270237
Cilium and associated proteins [BR:
crg03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
136270237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-rbx1
zf-RING_10
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
136270237
NCBI-ProteinID:
XP_065923312
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All DBs
Position
7:8638070..8643538
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AA seq
883 aa
AA seq
DB search
MEEEKPKKKKSSRSHKKKSSEPIKTSKDTEKSSEKTLSTTGHEKDVADNEGESSRKSNAG
SPEGGCPICLGKLDNTSFTDSCFHQFCFTCLKEWTKVKPECPLCKQKYTSILFNVTSYEK
YEQISVADIQSANQAENPHHRFRYRTTLTVERRLMLDFPDAARSHIEHDYTLMRPSRTTT
TRTHWRRQRESATSDFRRNVYMNGLRALEFRDQRMRERDITPEFFTRNPATLHRLVPWLN
RELNALLNNDNNNRQQFLMDFILGLIKTYPISSEEFYNHIYPYLGRRTRQFMHEFETFAK
SPYNISAYDQNIVYEPQPIEVISAGESTEEEEEDNDDVIIIDQGGSSNDPIDLSEMDSPP
QPPSQTPPPLPQEPYPDEPRQPPREPPAERRTSNTSNPDYTPILDRVRRFLEEPPPHPSS
LPSAGWDSPIPGPSWMDTNSDSGGVQEIPLPTTPPVLSTDMASVTLSQEKDPLPPPKKKG
GIPIFPPMLTELFNNAGKTAIKIENSDDSDESSIGSDVIFISIENPWEARPAVVLSSDEE
GEQNNQHTSKTERKKDRLKHDDRNSTSSKRSRSRHERHHHRYEISSSRSRSRERSHAHHP
KKRHKKHKSREYERYRSRSRSRERHGYHLEPNLYNYYDSRFYSSSRPSYEDEYYSRMSRP
RLVDDRRDWDYGRSYSRVIEAEYDRPKKYAYRSSSEDSYSHRSKKSKKAKKHKKHKKHKK
HKATYISSDSDFDIIAVGRPKPAPVEAQERQDTAEKTSSSAIESGKYKKHPTGHKKKTSS
TVPASSTSRETSVACGHAPTSPPDEGIIQEISEGNLCLSPISDGSTDSQMNLLHQPAVSE
GSSSKPSTSQPHNKGQSPVNTSINNYLSDISDGASEEGEISDF
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaaaaaccaaagaaaaagaaaagcagcagaagtcataaaaagaaaagcagt
gaacccattaaaactagtaaagacactgaaaagtccagtgaaaagactctatccacaaca
ggacacgagaaggatgtggcagacaatgaaggagagagtagtcggaaatcaaatgcaggt
tctccagaaggtggctgtccaatttgtctgggtaaactagacaacacttccttcacagac
agctgttttcatcagttctgtttcacttgtctcaaagagtggactaaagtgaaaccagag
tgtcccctatgcaaacaaaaatacaccagtatcttgtttaacgtcacatcgtatgagaag
tacgaacagataagtgttgctgacattcagagtgccaatcaagcggagaacccccaccat
aggttcaggtatcgaacaacgttgactgtggagagaaggttgatgctggactttccagat
gcagctagatctcacattgaacatgattacactctgatgagaccttctcgaacaacaacc
acgaggacccattggagaagacaacgagagagtgctacctcagactttaggagaaacgtg
tacatgaacggactgagagctcttgaatttcgtgatcaaagaatgcgggaaagggacatc
actccggagttcttcaccaggaatccagccacactgcatagactggttccatggctaaac
cgagaactaaatgctctgctaaataatgacaataacaatcgtcagcagtttttaatggac
tttattcttggactgattaaaacatatccaatcagcagtgaagaattttacaatcatatc
tatccttatctaggtagacgcactagacagtttatgcatgagtttgaaacttttgccaaa
agtccatacaacattagcgcttatgaccagaacattgtgtatgaaccacaacctattgag
gtgatatcagctggagaaagcacagaagaagaggaggaggataatgatgatgtcattatc
attgatcagggtgggtcaagcaatgatcctattgacctctctgaaatggattcaccacct
caaccaccctcccaaacaccaccaccattgccacaggaaccatatccagatgaacctcgt
caaccaccgagagaaccgccagccgagcggagaactagtaatacaagtaaccctgactac
acaccaattctggatcgggttcgtagattccttgaggaaccaccccctcatccttcaagc
cttccttctgctggatgggattccccgatacctggaccatcatggatggacaccaatagt
gattcagggggggtacaggagatacctttacccactactccacccgtcctttccaccgac
atggcctctgtaaccctatcccaggaaaaagacccactgcctccacccaaaaagaaaggt
ggaatacctatttttcctccaatgctgacagaactgttcaacaatgctggtaaaacagcc
ataaagatagaaaacagtgatgactcagatgagtcctctatagggagtgatgttattttt
atatccattgagaacccctgggaggcaaggcctgctgttgtcttatcttcagatgaggaa
ggagaacaaaacaatcagcatacctctaagactgaaaggaaaaaagacagactgaagcat
gatgataggaattcaacatcgtccaaaagatcacggtccaggcatgagcgccatcaccac
aggtacgaaatatctagcagccgctcaaggtccagagaaagaagccatgcccatcatcct
aaaaagcgccacaagaaacacaaatcccgagaatatgaacgatacagatctaggtcacgt
tcccgtgagagacacggttatcatctggaaccaaatctttataactattatgacagtaga
ttctattccagcagtcgtccatcttatgaagacgaatactattcaaggatgtcaagacca
agacttgtagatgataggcgagactgggactatggccgttcatatagtagggtgattgaa
gctgaatatgatcgtcccaagaagtatgcttacagatccagtagtgaggattcatactcc
catagaagcaagaagtctaaaaaggcaaagaaacataaaaaacacaagaagcataaaaag
cataaagcaacatacatttcatctgattctgattttgatatcatagcagtagggaggcct
aaaccagcacctgttgaagctcaagaaaggcaagacactgctgaaaaaacctcaagttct
gcaattgaatcagggaaatataaaaagcacccaacaggacacaagaagaagacctcctct
acagttcctgcgagttctacaagccgggagacgtcagttgcgtgtggacatgcccccaca
agccctccagatgaagggatcattcaggagatctcggaggggaacctctgtttgagtcca
atctcggacggttccaccgactcccagatgaacctgctgcatcagcccgctgtctctgag
gggtcctctagcaagccatctacctcccagccccacaacaagggtcagtcaccagtgaac
acctccattaacaattacttgtctgacatttcagacggcgcctccgaagagggtgaaatt
tctgacttctaa
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