Magallana gigas (Pacific oyster): 136271329
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Entry
136271329 CDS
T03920
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crg03000
]
136271329
04121 Ubiquitin system [BR:
crg04121
]
136271329
Transcription factors [BR:
crg03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
136271329
Ubiquitin system [BR:
crg04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
136271329
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
136271329
NCBI-ProteinID:
XP_065927215
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Position
9:6878895..6881365
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AA seq
566 aa
AA seq
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MCAKDLRPLSIVNGVGFRNFVHSLDPTYVVPSHTTMKNYTNYYYGSLKQTVATELQSQSS
LAFTTDTWTSCATEGYLTLTAHFIDSMWQLRYYVLATIEVKDHHTGENLANEIKCIVEDF
GISNTPVSGITTDNAANMVTMTTHLDWPHIRCFAHTLQLSVKAGLKIKEISSAAAAARKL
VGHFKRSSLASNELKSRQRQLDLPEHSLLQDVPTRWNATYIMFERLIEQRLAIFAVLHNN
TITSPSDARILELPDQVWKVIEDLVPVLKPLQVATTTISGTSFPTLSMVYPIVIGLLKNH
LNVQGEDSTVLVKFKEAVTKDLSSRFPKSDHDLATHHAVLTCALDPRYKSLKFMTDEQRN
LVKSSIEKFDTQTEQVPVEPPVAVKSENTDNAESNKAEVNAMSFLLGDLVDLTGEEVDAE
KSLVQEYEMFVRETAVKRNADPLDWWKNKADSYKKLAPIAKFFLCIPGTSVPSERVFSDT
GNIVTKKRASLDPDTVNQLVFLRSVLSSTKTKVDSAEESVLPDDKNSASTSALEVKQERA
SEPPSPSKKESLPPLPLLEPDNDEDD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctaaagatctacgcccccttagcattgtaaacggagtagggtttagaaatttt
gtccactcacttgacccaacatacgtagtgccttcacacaccaccatgaaaaattacact
aattattactacggctcattaaagcaaacagtagcgactgaattacagtcacaatcatca
ttagctttcaccactgacacgtggacatcttgtgcaacagaggggtacctaaccctgaca
gctcattttattgatagcatgtggcaactacgttactatgtcttggctacgatagaggta
aaagatcatcacaccggggaaaaccttgcgaatgaaatcaaatgtattgtagaggacttt
gggatctccaatacaccagtgtcaggcataacaactgataatgccgccaatatggtaact
atgacaacacacctcgactggccacatattcgttgctttgcgcatactctgcagctaagt
gtgaaagctggacttaaaatcaaggaaatttctagtgcagcagcagcggccagaaaactt
gtcggccattttaaaagaagttctctggcctctaatgagctcaaatctcgtcagaggcag
ttagatttaccagaacactcactacttcaagatgtcccaaccaggtggaatgctacatat
ataatgttcgaaaggctcatagagcagcgccttgctatttttgcagtcctgcacaacaac
accattacaagtccttccgatgcgagaatcctagaattacctgatcaggtctggaaagtc
attgaggacttagtgccagtcttaaaaccacttcaggttgctacaactacaataagtgga
accagtttcccaactctcagcatggtttaccctattgttattggtcttcttaaaaatcat
ttgaatgtgcagggagaagacagcactgttctcgttaagtttaaggaagcagttaccaaa
gatctgtcgtctcggtttcccaagagcgatcatgatttagcgacacaccatgccgttctt
acgtgcgcacttgacccacgttacaagtccctgaaattcatgacagatgagcagaggaat
ctcgtcaaatcaagcatagaaaaatttgacacccaaacagaacaagtaccagtggaaccg
ccggttgcggtaaaatcggaaaatactgacaatgcagagagtaacaaggctgaggtcaat
gcaatgagttttctgttaggcgatctagtcgatttaacgggcgaagaagtagatgcggaa
aaatctcttgtacaagagtatgaaatgttcgtcagagagacagcggtaaagagaaatgcc
gatcctttagactggtggaaaaataaggcagatagctacaaaaaactggcgcccattgca
aagttttttctttgtatacccggcacgtccgttccctcagagcgcgtcttctcggatact
gggaatattgttacgaaaaagcgagcaagtctggaccccgacacagttaatcaattggta
ttcttaagatctgtattaagctctactaaaaccaaagtcgacagcgcagaggaatcagtt
cttcctgatgacaaaaattctgcttccacgagcgcacttgaagtcaaacaagagcgagcc
agtgagccaccaagtccgagtaagaaagaaagtttgccaccccttccattacttgagcca
gataatgatgaagatgattaa
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