Magallana gigas (Pacific oyster): 136271538
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Entry
136271538 CDS
T03920
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
crg
Magallana gigas (Pacific oyster)
Brite
KEGG Orthology (KO) [BR:
crg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
crg04054
]
136271538
Pattern recognition receptors [BR:
crg04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
136271538
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR_2
TIR
LRRNT
Motif
Other DBs
NCBI-GeneID:
136271538
NCBI-ProteinID:
XP_065927805
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Position
9:complement(19965508..19968665)
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AA seq
874 aa
AA seq
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MDVFFCVTLQIVVLHLFMITAAFETLHKKSWDTCYFGLAECKCQNVPNNLLKVDCSGRRL
NTLPAFNTSVIWIDLSNNEISNISSGFPRNVSYINLSHNNIQELVMHPFHGLSNLKTLNL
ERNMINITMVYSGLFADLTSLTELSLKGNIQDQFKPTVIKDDVFSELKSLETLKIDGPAN
VTFGKGFQSITMLQKLDLSGITGNCSFQRISHDMFSNMPKLTYVDVSACDILDIEEGAFG
KLQYLEHLDVSYNKQLGFASLPNITHNLNKTSIRVLRGNGINCLSGIGTKILKRHFENLK
HTNISEIYFEKNRLEQLEPRALRLLPNTITSISFGENKLTQGRYMIDFFFLQNIRVYNVS
VQLRPPPFPESIFERCSEKTDVLHANEQYFDNEDIQEKEGNKYESMMNDFIGSKWNEHHV
TFYIPKTLEVLYANMSRLYRTIPEFGLNATGIREIHAQDNFLYSWDGPVHGVENIKIMDL
SNNFCSHISKSFLKYARGLTTLRMSKNDIGKSLSSDVEGEIFENTVSMEVLDLSYTNIVD
LSAPMFKSMERLQTLNLQNNQLSTWRVKVDHMKTIQFINLKQNRLTTFGKEAQMSLAKLF
QITNLSIDLSGNQFLCSCDSVHFLEWITGYRNHFIHFKRYECSSTSSHRFNFSDADNSLK
LLKKNCKSYLVIYIVTSVAVAIMFSIIFGIFLLKNKWKIRYVIYRLKQRFKTYTGHSIIP
QADSPSYEYDIMISYCPKELSFVLTDVIPRLENEAGFQLYVKDRDEPVGISCGEAIMEAI
QKSKRVVCLVTKGFLKSIWQDYELNMSRMEAIEDRENLNFVHLILFPDVCNGSISIQTLD
LVRQECFSEYPEEECAFDDFWETLISHIKELNRH
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgttcttctgcgtgacccttcaaatagttgttttacacttgtttatgataaca
gcagcatttgaaactctccataagaaaagctgggacacctgctattttggattagctgaa
tgtaaatgccaaaatgttcctaacaatctgctgaaagtcgattgttctggacgacgactc
aatacccttccggcatttaacaccagtgtgatatggatagacctgagcaataatgagatt
tccaacataagcagtgggtttccaagaaatgtatcctacattaatttgtcccataataat
atacaggaacttgttatgcatcctttccatggattatccaatctcaaaactttgaatttg
gaacgaaatatgattaatataacaatggtgtacagtggtctatttgccgatcttacttct
ctcactgagttgagtttaaaaggtaatatacaagaccaattcaagccaacagtgattaaa
gacgatgtgttctccgaattaaaatcattagaaacccttaaaattgacggaccggctaat
gtaacatttggaaaaggatttcagagcattaccatgttgcaaaaactcgatttatctgga
ataacaggaaattgcagttttcaaaggatatctcatgatatgttttcgaatatgcctaaa
ctcacctacgtcgatgtgtctgcttgtgatattttggatattgaagaaggtgcatttgga
aagctccaatatctcgaacaccttgatgtttcttataacaaacaacttggatttgcatca
cttccaaatataactcataacctaaacaaaacatcgataagagttttgcgtggtaatgga
ataaattgtttgtcaggaatcggtacaaagattctaaaacgtcattttgaaaacttgaaa
cacacaaacatttccgaaatctactttgaaaagaacagactagagcaactggagcctaga
gcgcttcgactgttgccaaacacaataacaagcatttcgtttggagaaaataaactaact
caaggaaggtatatgatagattttttctttttacaaaacatacgtgtttataacgtaagt
gtacagcttcgtccaccgcctttccccgaatcaatatttgagcgttgctcggaaaaaact
gatgtcttgcatgcaaatgaacaatattttgacaatgaagatattcaggaaaaagaagga
aacaaatatgaatctatgatgaacgatttcataggcagcaagtggaatgagcatcatgtg
accttttatattccaaaaacattggaggttttatatgcaaatatgagtcgactttacaga
actatacctgaatttggattaaatgccactggcataagagaaatacatgcacaagacaat
tttctgtattcatgggatggaccagttcacggtgtcgaaaacataaagattatggacctc
tcaaacaatttttgctcgcacatttcaaaatcgttcttaaaatacgcacgaggcctgacg
acgttacgcatgtccaaaaatgatattggtaagagtctgtcaagtgatgtggagggagag
atatttgagaacacagtgtcaatggaggttcttgatttatcttatactaatattgttgat
ctttctgcgcctatgtttaaaagcatggaaagactacaaacattaaacttacagaacaat
caactatcgacatggcgtgtgaaagtggatcatatgaaaactatacagttcattaacctt
aaacaaaatagactgacaacatttggaaaagaagcacaaatgtcattggcaaaattattt
caaataacaaatctttccatcgatttatcgggaaatcagtttctttgctcttgtgacagt
gtacactttctggaatggattactggttatcggaaccatttcatacattttaaacgttac
gagtgttcgtccacaagctcacatagatttaatttttcggatgctgataactctttaaag
ttactgaagaagaactgcaaatcttatctagttatatatatagtcacttcagtagcagta
gctatcatgtttagtattatcttcggcatttttctcttgaaaaataaatggaaaattcga
tacgtgatttatagattgaaacaacgtttcaaaacatatacagggcattcaataatccct
caggcagactctccttcttatgaatatgatattatgatttcatattgtccaaaagaacta
tcattcgtccttaccgacgtgattcctcgacttgaaaacgaggctggttttcagttgtat
gtcaaggaccgcgatgaaccagtgggaatttcttgtggagaagccattatggaagctatt
caaaaaagcaaaagagttgtatgtcttgtgacaaaaggttttctaaaatccatatggcaa
gactacgaattaaatatgtcaaggatggaagctatcgaggacagagaaaatttgaatttt
gtccacttaatcctatttcctgatgtttgtaatggatctatttccattcagaccttagat
ctcgttagacaagaatgtttttccgagtatccagaggaagagtgtgcgtttgatgatttt
tgggagacattgatatctcatataaaagaactcaaccgacattaa
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