Candidatus Carsonella ruddii HC: A353_039
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Entry
A353_039 CDS
T02197
Symbol
trmU
Name
(GenBank) putative tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
crh
Candidatus Carsonella ruddii HC
Brite
KEGG Orthology (KO) [BR:
crh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
A353_039 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crh03016
]
A353_039 (trmU)
Enzymes [BR:
crh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
A353_039 (trmU)
Transfer RNA biogenesis [BR:
crh03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
A353_039 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
AFP83893
UniProt:
J3YPY6
LinkDB
All DBs
Position
complement(34209..35072)
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AA seq
287 aa
AA seq
DB search
MINILLNSGGKDSNFFNFNLFCYNLFIKINNCYSYFEQKYSFLNSKYIKKKIFYIFLNKE
YYYIINNYKKNNIDFYCNKLIKIYLIKIILNKKLLFTGHYFKKIKNYFFSSIDQKKDQTY
FLNYKNNIFSINGYFNKKKILFFSIKNNFFCSKKKNTTGVCFKKKINFFLYIFFIENKIL
FNIIKIKKNLNLGKKFFNFKIIYIKKKIIIISKYKVKYSIIIIKKINLKNIFFKLNSQSL
KKNGKIINFKGKTFLIFYKKNFFIEKNNILIFYNDLIINNFKIKKKN
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgattaacattttattaaattctggaggaaaagattctaatttttttaattttaattta
ttttgttataatttatttataaaaattaataattgttattcttattttgaacaaaaatat
tcttttttaaacagtaaatatattaaaaaaaaaattttttatatttttttaaacaaagaa
tattattatataattaataattataaaaaaaataatatagatttttattgtaataaatta
attaaaatatatttaataaaaataattttaaataaaaaattattatttactggtcattat
tttaaaaaaataaaaaattattttttttcttctattgatcaaaaaaaagatcaaacttat
tttttaaattataaaaataatatattttctataaatggttattttaacaaaaaaaaaata
ttatttttttctataaaaaataactttttttgttcaaaaaaaaaaaatactacaggagtt
tgttttaaaaaaaaaataaatttttttttatatatattttttattgaaaataaaatttta
tttaatattattaaaataaaaaaaaatttaaatttaggaaaaaaattttttaattttaaa
attatatatattaaaaaaaaaattattattattagtaaatataaagttaaatattcaatt
ataattataaaaaaaataaatttaaaaaatattttttttaaattaaattctcaaagttta
aaaaaaaatggaaaaataataaattttaaaggaaaaacatttttaatattttacaaaaaa
aatttttttatagaaaaaaataatattttaatattttataatgatctaataattaataat
tttaaaattaaaaaaaaaaattaa
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