Candidatus Carsonella ruddii HC: A353_064
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Entry
A353_064 CDS
T02197
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
crh
Candidatus Carsonella ruddii HC
Pathway
crh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A353_064 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crh03019
]
A353_064 (groEL)
03110 Chaperones and folding catalysts [BR:
crh03110
]
A353_064 (groEL)
03029 Mitochondrial biogenesis [BR:
crh03029
]
A353_064 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crh04147
]
A353_064 (groEL)
Enzymes [BR:
crh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A353_064 (groEL)
Messenger RNA biogenesis [BR:
crh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A353_064 (groEL)
Chaperones and folding catalysts [BR:
crh03110
]
Heat shock proteins
HSP60 / Chaperonin
A353_064 (groEL)
Mitochondrial biogenesis [BR:
crh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A353_064 (groEL)
Exosome [BR:
crh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A353_064 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
A353_064 (groEL)
Exosomal proteins of breast cancer cells
A353_064 (groEL)
Exosomal proteins of colorectal cancer cells
A353_064 (groEL)
Exosomal proteins of bladder cancer cells
A353_064 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DOCK_N
Toprim
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
AFP83913
UniProt:
J3YQ01
LinkDB
All DBs
Position
complement(49879..51468)
Genome browser
AA seq
529 aa
AA seq
DB search
MGFKKIKFGDEARKNLANGVNLLANAVKTTLGPKGRNVILDKNFSSPLVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTSDIAGDGTTTATVLAQSIVNEGIKAVISGMNPMDLKRGI
DKAIYHSVLELKKISIPCIDTLSISQVGTISANGEKIIGKIISDAMNRVGKNGVITVDEG
KGIEDELEVVEGMQFDRGYISPYFINNQENMSSNLENCYVLITDKKINSIREIISILELI
SKKNKSLFIIAEDIEGEALATLVINNIRGILKINAVKAPGFGDRRKDILTDIAILTGSTL
ISDEIGISLEKIKIEDLGIAKKISSNKDNTIIVGGNGDENKIKERIKNIQKQIKESNSDY
DKEKLQERMAKLSGGVAVIRVGAATEIEMKEKKARIEDALHSTRAAVEEGVVIGGGVALI
RILEKLKNLKGENNDQNYGIYIALKSLETPLKQIVKNSGEEPSIVLHNIKSSSKNFGYNA
SNGVYGDMFKMGIIDPVKVTRSALQSAGSIGGLLITTEAMIADYEEQKN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgggttttaaaaaaataaaatttggagatgaagcaagaaaaaatttagcaaatggtgtt
aatttattagcaaatgctgttaaaacaactttaggtcctaaagggagaaatgttatttta
gataaaaattttagttctccgttagttactaaagatggagtttcggtagcaaaagagatt
gaattaaaagataaatttgaaaatatgggagcacaaatggtaaaagaggttgcctctaaa
acttctgatattgctggagatggaactactactgctacagtattagctcaatcaattgtt
aatgaaggtattaaagctgtaatatcaggtatgaaccctatggatttaaaaagaggtatt
gataaagcaatttatcattcagtattagaattaaaaaaaatttctattccttgtattgat
acattatcaatttctcaagtaggtactatttctgctaatggagaaaaaataattggaaaa
ataatttcagatgctatgaatagagtaggaaaaaatggagttataactgtagatgaagga
aaaggaatagaagatgaattagaagttgttgaaggtatgcaatttgatagaggatatatc
tctccttattttataaataatcaagaaaatatgtcatctaatttagaaaattgttatgtt
ttaattacagataaaaaaataaatagtattagagaaattatttctattttagaattaata
tcaaaaaaaaataaatctttatttataatcgctgaagatattgaaggtgaagctttagca
acattagtaataaataatattagaggaatattaaaaataaatgctgttaaagcacctggt
tttggagatagaagaaaagatattttaacagatattgctatattaactggatctacttta
atttctgatgaaattggtatttcattagaaaaaataaaaattgaagatttaggaattgca
aaaaaaatatcttctaataaagataatactattatagttggtggaaatggagatgaaaat
aaaattaaagaaagaataaaaaatattcagaaacaaattaaagaatctaattctgattat
gataaagaaaaattacaagaaagaatggctaaattatcaggaggtgttgcagtaatcaga
gttggtgcagcaacagaaatagaaatgaaagaaaaaaaagctagaatagaagatgcttta
cattcaactagagccgcagttgaagaaggtgttgttattggtggtggagttgcattaata
agaattttagaaaaattaaaaaatttaaaaggtgaaaataatgatcaaaattatggtata
tatatagcattaaaatctttagaaacacctttaaaacaaattgtaaaaaattctggtgaa
gaaccatctattgttttacacaatataaaatcttcatcaaaaaattttggatacaacgca
tctaatggtgtttatggagatatgtttaaaatgggaataattgatccagtaaaagttact
agaagtgcattacaatctgctggttctataggaggtttactaatcacaactgaagcaatg
attgctgattatgaagaacaaaaaaattaa
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