Chryseobacterium rhizoplanae: KB553_05070
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Entry
KB553_05070 CDS
T08349
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
crhi
Chryseobacterium rhizoplanae
Pathway
crhi00010
Glycolysis / Gluconeogenesis
crhi00020
Citrate cycle (TCA cycle)
crhi00260
Glycine, serine and threonine metabolism
crhi00280
Valine, leucine and isoleucine degradation
crhi00310
Lysine degradation
crhi00380
Tryptophan metabolism
crhi00620
Pyruvate metabolism
crhi00630
Glyoxylate and dicarboxylate metabolism
crhi00640
Propanoate metabolism
crhi00670
One carbon pool by folate
crhi00785
Lipoic acid metabolism
crhi01100
Metabolic pathways
crhi01110
Biosynthesis of secondary metabolites
crhi01120
Microbial metabolism in diverse environments
crhi01200
Carbon metabolism
crhi01210
2-Oxocarboxylic acid metabolism
crhi01240
Biosynthesis of cofactors
Module
crhi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
crhi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
crhi_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
crhi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
crhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
KB553_05070 (lpdA)
00020 Citrate cycle (TCA cycle)
KB553_05070 (lpdA)
00620 Pyruvate metabolism
KB553_05070 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
KB553_05070 (lpdA)
00640 Propanoate metabolism
KB553_05070 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KB553_05070 (lpdA)
00280 Valine, leucine and isoleucine degradation
KB553_05070 (lpdA)
00310 Lysine degradation
KB553_05070 (lpdA)
00380 Tryptophan metabolism
KB553_05070 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KB553_05070 (lpdA)
00670 One carbon pool by folate
KB553_05070 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crhi04147
]
KB553_05070 (lpdA)
Enzymes [BR:
crhi01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
KB553_05070 (lpdA)
Exosome [BR:
crhi04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
KB553_05070 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_oxidored
FAD_binding_2
GIDA
NAD_binding_8
HI0933_like
FAD_binding_3
AlaDh_PNT_C
DAO
Lys_Orn_oxgnase
Thi4
3HCDH_N
IFT46_B_C
TbsP_N
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
UCA60904
LinkDB
All DBs
Position
complement(1123446..1124849)
Genome browser
AA seq
467 aa
AA seq
DB search
MSQFDVTVIGSGPGGYVAAIRAAQLGFKTAIIEKYSTLGGTCLNVGCIPSKALLDSSEHF
ENAKHNFAGHGIIINEPQADLARMIERKNEVIKQNTDGISYLMSKNQITVFEGVGSFESA
TQVKITKNDGSSETIESKYTIIATGSKPSTLPFISLDKERVITSTEALNLKEIPKHLVVI
GGGVIGLELGSVYLRLGAQVTVVEFMDKIIPGMDGALSKELTKVLKKQGMKFMLSTAVSA
VERNGDTVKITAKDKKGEEVVVEGDYCLVSVGRKPYTDGLGLEKAGVELDERGRVKVNDH
LQTNVANIYAIGDVIKGAMLAHKAEEEGVFVAETLAGQKPHINYNLIPGVVYTWPEVAGV
GKTEEQLKEEGVAYKVGSFPMRALGRSRASGDIDGLVKIIADEKTDEVLGMHIVGARAAD
LIAEGVIAMEFRASAEDIARSSHAHPTYAEAIKEAALDATAKRPIHM
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaattcgatgttaccgtaataggttctggtcctggtggttatgtagctgcgatc
cgtgcagcacagttaggtttcaaaacagcaattattgaaaaatattcaactttaggcgga
acttgtcttaacgttggatgtattccgtcaaaagcgcttcttgacagctctgaacatttc
gaaaatgcaaaacacaattttgcaggtcacggaatcatcatcaacgagcctcaggcggat
cttgcaagaatgattgagcgtaaaaacgaggtgattaagcagaatacagatggaatcagc
tacctgatgagcaaaaatcaaattacggtttttgaaggagtaggaagctttgaatctgct
actcaggtcaaaatcactaaaaatgacggttcttctgaaactattgaatctaaatatacc
atcattgcaacaggttctaaaccatctactttaccttttatctctcttgataaagaaaga
gtaattacttctactgaagctttgaaccttaaagaaattcctaagcacttagtagtaatc
ggaggtggagttatcggtcttgaattaggatctgtatacttaagattgggagctcaggta
actgtagttgagttcatggataaaatcatccctggaatggacggagctttaagtaaagaa
ttaactaaagttcttaaaaagcaaggtatgaagtttatgctttctacagcagtttctgca
gtggagagaaacggagatacagtaaagattaccgctaaagataaaaaaggagaagaagta
gtagtagaaggagattactgcttggtttctgtaggtagaaaaccttatacagacggtctt
ggtcttgaaaaagcaggagtagaattagacgaaagaggaagagtaaaagtaaacgatcac
cttcagactaacgttgctaacatctatgctatcggagacgttatcaaaggtgcaatgctt
gctcacaaagctgaagaagaaggagtttttgttgctgaaactttagcagggcaaaaaccc
cacatcaactacaacttaattcctggtgttgtttatacttggccggaagtagcaggagtt
ggtaaaactgaagagcagttaaaagaagaaggagtagcttacaaagtaggttctttccca
atgagagctctaggaagaagccgtgcaagtggtgatatcgatggtcttgttaaaattatt
gcagacgaaaaaactgatgaagttttaggaatgcacattgtaggagcaagagctgccgac
cttattgctgaaggggtaattgctatggaattccgtgcaagtgctgaagatattgcaaga
agctctcacgctcacccaacttatgcagaagctattaaagaagctgcgttggatgctaca
gcaaaaagacctatccacatgtaa
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