Chryseobacterium rhizoplanae: KB553_06145
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Entry
KB553_06145 CDS
T08349
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
crhi
Chryseobacterium rhizoplanae
Brite
KEGG Orthology (KO) [BR:
crhi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crhi02000
]
KB553_06145
Transporters [BR:
crhi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KB553_06145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
DUF5410
TPR_14
Bombinin
Motif
Other DBs
NCBI-ProteinID:
UCA61108
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All DBs
Position
complement(1342758..1344221)
Genome browser
AA seq
487 aa
AA seq
DB search
MNKKYIIAAAFLILGAVNQSCSNDFIEVSPTESIPESNVDIYNSNEGASSFVTSIYAKFL
DWNMSTFAWIGVTSIVSDDADKGSSPGDTGSDKDILDALNFTPSTPSFKELFASNYQGIN
RANQALKYIPMLDKADPELRKRLIGEAKFLRAFMYFTLVRSFGGVPLVDHVPVSGLEEDK
KMTLTRKSKDEIYAFIEKDLKEAIEALPEKSTYTGNNVGRASVGAAHALLAKVYLYQKKW
QLAVDECGKVTGYSLTPVFQDIYKVSGENNAESVFEINGSGGTAGRAIQQYSQVQGARGT
TGWGWGFATPTQGLYDAYTADDTRRDATIIHRDMTLYDGYYVGPFVENKFYNYKAYSSNY
RSSGATDVNIRYLRYAEVLLIKAEALNELGQTSDAIPLLNEVRKRANIAPTTATSQADVR
AAIWKERRLELAFEHDRWFDLVRTGQAQAAMAADGGKKFIVGKHELFPLPQDFIMEAGGL
SQQNPGY
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaaatatatcatagccgccgcatttttaattttaggcgctgtaaaccaaagc
tgcagtaatgactttatagaagtatctcctactgagtctatccctgaaagtaatgtagac
atctataatagtaatgaaggagctagtagttttgtaacatctatttatgcaaaatttttg
gattggaatatgagtacgtttgcatggataggggttacttctattgtgtcggatgatgct
gataaaggatcaagccctggagatacaggatcagataaggacattcttgatgctttgaac
tttacaccgtccaccccgtctttcaaggaactttttgcttctaattatcaaggaattaac
agagcaaatcaggcattgaaatatatccctatgctagataaggctgatcctgaattacgt
aagagattaattggtgaggctaaattcctgcgtgcttttatgtattttactttagttcgt
tcatttggaggtgttccattagtagatcatgttcctgtttcaggacttgaagaagataag
aagatgactttgacaagaaagagtaaagatgagatctatgcatttattgaaaaggactta
aaagaggcaattgaagctcttcctgaaaagtcaacatacactggaaataatgtcgggaga
gcttctgtaggagcagcacatgctcttttggcaaaagtatatctctatcagaagaaatgg
caacttgcagtggatgagtgtggtaaagttacaggatattcactaacgccagttttccag
gatatttataaggtttcaggtgaaaataatgcagaatcagtttttgagatcaatggaagt
ggaggaactgcaggaagagctattcagcaatatagtcaggtacagggagcaagaggtact
acaggttggggctggggatttgcaactcctacacaaggattgtatgatgcctatacagct
gatgataccagaagggatgctacaataattcatagagatatgacattatacgatggatat
tatgtgggcccattcgtagaaaataaattttataattataaagcatattcatctaattat
agaagttccggagctacagatgtcaatatccgttatttaagatatgcagaagtcttatta
attaaagcagaagctcttaatgaactggggcaaaccagtgatgctattccgttactgaac
gaggtaagaaaaagagctaatatagcaccaactacagctacttcacaagcagatgtaaga
gcagcaatctggaaagaaagaagattagagctggctttcgagcacgacagatggtttgat
cttgtaagaacaggtcaggcacaagctgcaatggctgcagatggaggaaaaaaattcatc
gttggaaagcatgaattattcccacttcctcaggatttcattatggaagcaggaggactg
tctcagcaaaacccaggatattaa
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