Chryseobacterium rhizoplanae: KB553_13565
Help
Entry
KB553_13565 CDS
T08349
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
crhi
Chryseobacterium rhizoplanae
Brite
KEGG Orthology (KO) [BR:
crhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crhi03032
]
KB553_13565 (topA)
03400 DNA repair and recombination proteins [BR:
crhi03400
]
KB553_13565 (topA)
Enzymes [BR:
crhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KB553_13565 (topA)
DNA replication proteins [BR:
crhi03032
]
Prokaryotic type
DNA Topoisomerases
KB553_13565 (topA)
DNA repair and recombination proteins [BR:
crhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KB553_13565 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
YqfQ
Motif
Other DBs
NCBI-ProteinID:
UCA58078
LinkDB
All DBs
Position
complement(3011993..3014554)
Genome browser
AA seq
853 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLATFSPDYEVSADKK
KLVTELKAAVKKADMVWLASDEDREGEAIAWHLADELKLKPENRKRIVFHEITKNAILKA
IENPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLIVEREKE
IREFVPKASFKLDGIFLNNTEQEIAAKLKKDFGKEAEAEKFLEQAKTTEFKVLNVETKPG
TRSASAPFTTSTLQQEASSRLGYNVTNTMRLAQRLYEEGFITYMRTDSVNLSQEAIEGAK
KQIISEYGAEYSSPRNYTTKSASAQEAHEAIRPTDFGVKSIGDAQLNKLYQLIYRRTLAS
QMANAKIEKTVIEIGNTSLPHHFEAQGEVIIFDGFLKAYGIVKTEDDDEENNEKLLPKVK
VGEVLSYKSITATEKFTRPSARYTEAGLVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IEPHTREVIKMSLVKDKIKKSVLEEKFGGDKNKFVPTDIGEVVNDFLTDNFREILDYGFT
ARVEESFDEIASGDQKWKEMMTNFYSKFHPRIEDVEENADRATGDRLLGVDPKTGKNVHA
RIGRFGAMIQIGETDDEEKPIFASLMAGQNIATITFEEALELFKLPFELNDYEGHAVSVG
VGRFGPYVKWGETFISIPKGEDPLSVDQNRAEEIINEKKRADAPIATYKGEPVTKGTGRF
GPFIKYKDIFVNVPKKYNFDNLSQSDINELIDAKLEKEANRYIQQWEKEKISLENGRWGP
FIKFGKAMFKIPKKSDDTKYDAEELKEISLEEVKKWITDQDKNAFAEKKKPAAKKAATTK
KTTAAKKPAAKKK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatttagtaatcgtagagtccccggcaaaggcaaaaactattcagaaatat
ttaggtaaggattttgaagtaaaatccagtttcggtcatatccgggatctgcctaaaaaa
ggaatgggaatagatcttgccacctttagtcctgattacgaagtttctgcagacaagaag
aaattggttacagaattaaaggccgcggtaaagaaagcagacatggtttggctggcttcc
gatgaagaccgcgagggagaagccattgcatggcacttagcagatgaattgaaactgaag
cctgaaaacagaaaaagaattgttttccacgagattactaaaaatgccattctaaaagca
attgaaaatccaagggatattgatcagaatttagtgaatgcccagcaggcaagaagagtg
ctggacagaattgtaggttttgaaatgtcaccggttttatggaaaaaagtaaaaccaggg
ctttccgcaggaagagtgcaatcggtagccgtaaggttaattgttgaaagagaaaaggaa
atccgtgagtttgtgcctaaagcaagttttaaactggacggaattttcttaaacaataca
gaacaggaaattgcggccaaacttaaaaaagacttcgggaaagaagctgaagcagaaaaa
ttccttgaacaggcaaaaactacagaatttaaagttctgaatgttgaaaccaagcctgga
acacgttctgcatctgcaccttttaccacttccacactacagcaggaagcttcttcaaga
ttaggttataatgtaaccaataccatgcgtctggcacagagactgtatgaggaaggattc
attacgtacatgagaacagattccgtaaacctttctcaggaagccattgaaggagccaaa
aaacagattatctcagaatacggagcagaatactcttctccgagaaattatacaacaaaa
tcagcttctgcccaggaagcgcacgaagccatccgtcctacagatttcggagtaaagagc
attggagatgcacagctgaataagctgtatcagctgatctacagaagaacattagcttcc
cagatggcgaatgctaaaattgaaaaaacagtaattgagatcggaaatacttcattacca
catcattttgaagctcagggggaagtaatcatctttgatggtttccttaaagcttacggg
attgtaaagactgaagacgatgatgaggaaaacaatgaaaaactattaccaaaagtaaaa
gttggcgaagtactaagctataaatccattacggcaacagaaaaatttacaaggccaagt
gcaagatatactgaagccggattggttagaaaacttgaagaattagggattggaagaccg
tctacttatgcgcccactattcagaccatccagaacagagaatatgtggataaaagagag
attgaaccacatacccgtgaagtaatcaaaatgtctttggtaaaagataagatcaaaaaa
tcagttctggaagagaaattcggtggagataaaaataagttcgttcctacagacatagga
gaagttgtgaatgatttcttaacagataatttcagagaaatccttgattatggctttacg
gcaagagtagaagaaagcttcgacgaaattgcaagcggagaccagaagtggaaagaaatg
atgacaaacttctattctaaattccatccaagaattgaagatgtagaagaaaatgcagac
cgtgcaacaggagacagacttttaggggttgatccgaagaccggtaaaaatgttcatgcc
agaatcggaaggtttggagccatgatccagatcggagaaacagatgatgaagaaaaacca
atcttcgcgtcattaatggcaggccagaatattgcaaccattacctttgaagaagcattg
gagctgttcaaattaccttttgagctaaatgattatgaagggcatgccgtttctgttgga
gtaggaaggttcgggccttatgtaaagtggggagaaactttcatcagcattccgaaagga
gaagatccgctttctgtagatcaaaaccgtgcggaagagatcattaacgagaagaaaaga
gcggatgctccgattgctacatacaaaggagaacctgtaaccaaaggaaccggaagattc
gggccgttcattaaatacaaagatattttcgtgaatgttccgaagaaatataactttgat
aatctttcccaaagtgatatcaatgaactgattgatgccaagcttgaaaaagaagccaac
cgatatatccagcaatgggaaaaagaaaagatttctcttgaaaacggtagatggggacct
ttcatcaaatttggaaaagccatgttcaaaattccaaagaaaagtgatgataccaagtac
gatgcagaagaattgaaagaaatttccctggaagaagtaaagaaatggatcacagatcag
gataaaaatgcctttgcagaaaagaaaaaacctgcagcaaaaaaggcagcaactactaag
aaaactacagctgctaaaaagccggcagctaagaagaaataa
DBGET
integrated database retrieval system
