Chryseobacterium rhizoplanae: KB553_16625
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Entry
KB553_16625 CDS
T08349
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
crhi
Chryseobacterium rhizoplanae
Pathway
crhi02010
ABC transporters
crhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
crhi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KB553_16625
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KB553_16625
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crhi01002
]
KB553_16625
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crhi02000
]
KB553_16625
Peptidases and inhibitors [BR:
crhi01002
]
Cysteine peptidases
Family C39
KB553_16625
Transporters [BR:
crhi02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
KB553_16625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
AAA_21
Peptidase_C39_2
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
AAA_13
AAA_18
nSTAND3
NTPase_1
AAA_22
DEAD
AAA_23
DUF87
IstB_IS21
AAA_24
NACHT
KH_2
AAA_28
RNA_helicase
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
UCA58663
LinkDB
All DBs
Position
complement(3666305..3668431)
Genome browser
AA seq
708 aa
AA seq
DB search
MKENKLIQKTFSLQKDLTDCGVGCLQSLVRYYGGNISLEALREKSGTGKTGTTLLGLYQC
AEEIGFDAEGCEADIESLIKHAAPVVLHVIIDQKFEHYVICYSYNSSGNNQFYIGDPAKG
LEYWTKEYLEEVWISKTCLTLIPNEKFEKKKETQKKKKGWIKSLIKDDQESIYTILLLGF
AITMLGMSMSVFSQKLIDDILPRKKISLLLLSISFLGFLLFVKVGISSLRELYIIKQSKS
FNERANKSFYHTLLHLPKTFFDTRKIGDFTARLNDILRIQAVIKQLITSTLVDILGVLVS
VGFLFFYSWRLSLICIGISPIVFFIIFRFNKKIIDAQRNVMQAYSINESNYIDSIKGIDV
IKGFSKQHLFGKKNDLIFSFFQTKIFELGKLNLTISLYSGIILVIFLLIILGFSSYSVLN
NDIRIGELMAILGISSSLLTSITNLALVTIPIQEAKVAFDRMFEYSLLLDKENTEGQEIK
EIWSIDLSNIDFRFKGRSRLLNQISFRIRKGSVTCILGKSGSGKTTLTELLQKKFLPENG
EIRVNEEISLNNIAINNWRSLISVVPQNIQLFNGNVLENIILSENVNELQLQKVLSLGFD
HFIEALPQGYLTLVGEEGINLSGGQKQLLGWMRALYHEPQFLILDEPTSSLDQESRKFIY
QLIQKLKSEKSILVISHYLEDLKDIADDIYVINDTKIYEMSLTDHRNV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaataagctcatacaaaaaacattctctcttcaaaaagaccttacagattgt
ggtgtgggatgtcttcagtcattggttagatattatggaggaaacatttccttagaagct
ctcagagaaaaaagtggaaccggaaagacaggcactacattactgggactgtatcaatgc
gcagaagaaattggttttgatgcagaaggatgtgaggctgatatagaatcacttatcaaa
catgcagctcccgtagtcttacatgttattattgatcaaaaatttgaacattatgttatt
tgctattcatataatagctccgggaacaatcagttttatattggagatccggcaaaaggc
ttagaatactggaccaaagaatacctggaagaagtatggatctcaaaaacctgtctcacc
cttattcctaatgaaaagtttgagaagaaaaaagaaactcagaaaaagaaaaagggttgg
ataaaaagccttattaaagatgatcaggaatctatttatactattcttttacttggtttt
gccattacaatgttgggaatgtcaatgtctgttttttcacaaaaactgattgatgatatt
ttgccccgtaaaaaaatatctttactgttactaagtatctcttttcttggtttcttactt
tttgtaaaagtaggaattagttctttaagagaactttatattattaaacaaagtaaatca
tttaatgaaagagccaataagagtttctaccatactttactccatcttccaaaaactttt
tttgacaccagaaagattggagattttacagccagactcaatgacattctgagaatacag
gctgttataaaacaattaattacctctacacttgttgatattctgggagtcttagtatcc
gttggttttttattcttctactcctggaggctttctttaatctgtataggaatctcccct
attgttttctttattatattccgtttcaataaaaaaattattgatgcccaaagaaacgtt
atgcaagcatatagtatcaatgaatctaattatattgatagtataaagggaatagatgta
attaaaggattttccaaacagcatttatttggaaagaaaaacgacctcatttttagtttc
tttcaaacaaaaatttttgaacttggaaagctcaaccttacaatttcattatattccggg
attattttagtgatcttccttcttattattttaggattttcttcttacagtgtcttaaat
aatgacatcaggattggcgagctgatggccatactcgggatatccagttctttgcttact
tcaattacaaatctggcccttgttacaattcctatacaggaagcaaaagtggcatttgac
agaatgtttgagtattcattgttattagataaagaaaatacagaggggcaggaaattaaa
gaaatttggtctattgatctcagcaatattgattttagatttaaaggcagaagcaggctt
cttaatcaaatttcctttaggatacgaaaaggaagtgtaacctgtatcctaggaaaaagt
ggttccggaaaaacaacacttactgagttattacaaaaaaaattcctgcctgaaaatggt
gaaataagagttaatgaagaaatcagtttaaataatatcgcaatcaataactggcggagt
cttattagtgtagtcccacaaaatatacagctatttaatggaaatgtactggaaaatatt
atactcagcgaaaacgtgaatgagctccagttacagaaagtattatcgctgggatttgat
cattttatagaagctttgcctcagggttatttaacactggttggagaagaaggaatcaat
ttatccggtggtcagaaacagttgcttggatggatgcgtgccttatatcacgaacctcag
tttttaattttagatgaacctacctcctcgcttgatcaggaaagcagaaagtttatctat
cagttaattcaaaagctaaaatctgaaaaaagcatccttgtcattagccattatctggaa
gatctaaaagatattgcagatgatatttacgttatcaatgatactaaaatatatgaaatg
agccttactgatcatagaaacgtataa
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