Chryseobacterium rhizoplanae: KB553_19950
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Entry
KB553_19950 CDS
T08349
Name
(GenBank) peptidase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
crhi
Chryseobacterium rhizoplanae
Brite
KEGG Orthology (KO) [BR:
crhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crhi03016
]
KB553_19950
Enzymes [BR:
crhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KB553_19950
Transfer RNA biogenesis [BR:
crhi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KB553_19950
Prokaryotic type
KB553_19950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
UCA59271
LinkDB
All DBs
Position
4397512..4398453
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AA seq
313 aa
AA seq
DB search
MLQAEIKSLLNEDISILIKVPNSPKHYLCDCGEASLLTVKEVQMVSAIFISHTHIDHFAN
FDGIFRHQIGSGEKVTICGPKNIHQQIEARLKSYTWNLIAENAIEYEIHEIVSKEEINVY
TLRPPYWTQEFVNTQNFLFADEYVDVDFAILDHKTDSIAYLFKEKDSVTFHENVSDFKKG
KWISELKKAFENNDADKEIEIEKMGYTASELFHLLTRNEGYKLGVIMDHAVDEDNYEKIK
TVFAQADMVYIETFYKDTDQEFAKINYHSFASASGKIMSECRVKEAVPIHFSRRYTENDQ
QEIETAFYKAFRK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgttacaggcagaaataaaaagtctattaaacgaagacatcagtatattaataaaagtt
cccaactcaccaaaacattatttatgtgattgcggggaagcaagtttattgacggtaaaa
gaagtgcaaatggtatcagcaatattcatcagccatacccatattgatcactttgccaat
tttgacggaattttcagacaccagattggaagcggagaaaaagtaaccatctgtggacct
aaaaatattcaccagcaaattgaagccagattaaaatcctacacatggaatttaatagca
gaaaatgcaattgaatatgaaattcatgagattgtttccaaagaagaaatcaatgtttat
actcttcgtcctccttactggacacaggagtttgtaaacactcagaatttcctttttgca
gatgaatatgtagatgttgattttgctattctggatcacaaaacagattccattgcgtat
ctgtttaaagaaaaagattcagtgacttttcatgaaaatgtttctgattttaagaaagga
aaatggatcagcgaactgaaaaaagcctttgaaaataatgatgcagacaaggaaattgaa
attgaaaaaatgggatatacagcatcagaactgttccatttgttaacccggaatgaaggc
tataaattaggagtcattatggatcatgccgtagatgaagacaattatgaaaagataaaa
acggttttcgctcaggctgatatggtttatattgaaaccttttataaggatacggatcag
gaatttgcaaagattaattatcacagttttgcttctgcatcagggaaaattatgagtgaa
tgtagagtgaaagaagccgttccaatccatttttcaagaagatatactgagaatgaccaa
caggaaattgaaaccgctttttataaagcatttcgaaagtaa
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