Chryseobacterium rhizoplanae: KB553_20770
Help
Entry
KB553_20770 CDS
T08349
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
crhi
Chryseobacterium rhizoplanae
Pathway
crhi03420
Nucleotide excision repair
crhi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
crhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KB553_20770
03430 Mismatch repair
KB553_20770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crhi03400
]
KB553_20770
Enzymes [BR:
crhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KB553_20770
DNA repair and recombination proteins [BR:
crhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KB553_20770
MMR (mismatch excision repair)
Other MMR factors
KB553_20770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
UCH
Motif
Other DBs
NCBI-ProteinID:
UCA59423
LinkDB
All DBs
Position
4571880..4574213
Genome browser
AA seq
777 aa
AA seq
DB search
MDYLKGLNESQYEAVTSLQGPLMVLAGAGSGKTRVLTMRIAHLIHNGIDPFNILALTFTN
KAAREMKERIAKVVGDSNARSLWMGTFHSVFARILRIEAHYLGYPSNFTIYDQQDALNVI
KKVLKDMNIDADLYKPKKVQARISTYKNNLITVKAYFNNPELMEADEKANMKFIGQIYQR
YVEQCFKNGSMDFDDLLLKTNELLTRFPEVLAKYQDRFRYIMVDEYQDTNHSQYLIVKAL
ASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPDAITVSLEQNYRSTQNIVNAANVV
IAKNLQQFKKNVFSDNEVGDKIKIYRSLSDADEANFVAGNIWELRNRDQRKYSDFAILYR
TNSQTRAFEDALRRKNIPYKVYGGLSFYQRKEVKDLIGYLRLLINENDSEALMRIINYPA
RGIGDTTQNKLIVFADAQNIPVSKVLDNLPIYAPQLGLNNGVLNKINDFWSMIKAFQVLL
KTETAYSVAMEVAKRSGLIKFLKDDQTPEGISRVENVQELMNSMQGFIEEQMQLEDGDPS
LSNFLENIALSADTQDKDLEDDMVSLMTIHLSKGLEFPVVHLVGLEENLFPSFMSSATRE
DLEEERRLFYVALTRAEKQAFFSYAVSRFQWGKITDAEPSRFLSEIDDEYIEFLNPAMEK
RFINNSGVKSNIFDEHPSEVRSFKKVEKKTLNRSEDSSKPAPEVRKLKPVSTAKIINPSG
ASSQDIEVGDKVRHDRFGIGEVTFLDGTDPQNIKAKVVFMHEGEKNLILKYAKLTKI
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggattatctgaaaggactcaatgaatcacaatatgaagccgttacctctttacaaggc
cctctgatggtacttgctggagctggttccgggaaaacacgtgtgcttacgatgcgtatt
gcccaccttatccataacgggatagatcctttcaatatcctggcacttacctttaccaat
aaagcggcacgtgaaatgaaggaacgtatcgcaaaggttgtaggagacagtaatgcaaga
agcctatggatggggacatttcactcggtttttgcaagaattttgagaattgaggcgcat
tatctgggatatccttccaattttaccatttatgatcagcaggatgccctgaatgtgatt
aaaaaagtgctgaaggatatgaatattgatgcagatctttataaacctaagaaagttcag
gcaagaatttcaacctacaaaaacaacctgattaccgttaaagcttatttcaacaatccg
gaattaatggaagctgatgaaaaggctaatatgaaattcatcggccagatttaccagaga
tatgttgaacagtgtttcaaaaacggatcaatggattttgatgatttattgttaaaaacc
aatgaattattgactcgttttcccgaagtactggcaaaataccaggacaggttcaggtat
attatggtagatgagtatcaggataccaaccattcccagtaccttattgtaaaggccctg
gcgtctaagtttgaaaatatttgtgtggtaggagatgatgcacagtctatttactctttc
cgtggtgccaatatctataacatcctgaattttaaaaaagattacccggatgcgattaca
gtttctttggaacaaaattaccgttccacacaaaatattgtaaacgcagccaatgttgtt
attgcgaaaaacttacagcagtttaagaaaaacgttttcagtgataacgaggtaggagat
aaaattaaaatataccgttcactttccgatgctgatgaagctaactttgtggccgggaat
atctgggaactgcgcaaccgtgaccagagaaagtacagtgattttgctattttatacaga
accaactcacagaccagagcatttgaagacgctctgagacgtaaaaatattccgtacaaa
gtatatggaggactttcattctaccaaagaaaagaagtaaaagatctaatcggctatctg
cgtcttttaatcaatgaaaatgattcagaggcattgatgcgaatcataaactatccggcc
agaggtattggagatactacccagaataaactgatcgtgtttgcagatgctcagaatatt
cctgtttcaaaagttcttgataatttaccgatctatgctcctcaattagggctaaacaat
ggggtattgaacaaaattaatgacttctggtcgatgatcaaagcattccaggtgctgttg
aagactgaaacagcctatagtgttgccatggaagtagcaaaacgcagtggtttgattaag
ttcttaaaagacgaccagacacccgaaggaatttcaagagtagaaaacgtccaggaatta
atgaactctatgcaggggtttattgaagaacagatgcagttggaagacggagatccgagc
ctttccaatttccttgagaatattgctctgtctgcggatactcaggataaagacctggaa
gatgatatggtttctctgatgacgattcacctctccaaaggtcttgaatttcctgtagtt
cacctggtaggtcttgaagaaaatcttttcccgagtttcatgagttcagcaaccagagaa
gatcttgaagaagagaggcggttattttatgtagcgctaaccagggcagagaagcaggca
tttttctcttatgcggtttcccgtttccagtgggggaaaattactgatgcagaaccgtca
aggttcctgagcgagattgatgatgaatatatagaattcctgaatcctgctatggaaaaa
aggtttatcaataattcaggagtgaaatccaatatttttgatgaacatccctctgaagta
agatcttttaaaaaagtagagaaaaaaacacttaacaggagtgaggatagctcaaaacct
gctccggaagtaagaaaactgaagccggtaagcacagctaaaattattaacccaagcggc
gcttcttctcaggatattgaagtgggagataaagtaagacatgaccgtttcggaatagga
gaggttactttcctggacggaacagaccctcagaatatcaaagcaaaagtagtatttatg
catgaaggtgaaaagaacctgatactgaaatatgctaaacttactaagatttaa
DBGET
integrated database retrieval system
