Candidatus Carsonella ruddii DC: CRDC_00555
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Entry
CRDC_00555 CDS
T02774
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cri
Candidatus Carsonella ruddii DC
Pathway
cri03030
DNA replication
cri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CRDC_00555 (dnaQ)
03430 Mismatch repair
CRDC_00555 (dnaQ)
03440 Homologous recombination
CRDC_00555 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cri03032
]
CRDC_00555 (dnaQ)
03400 DNA repair and recombination proteins [BR:
cri03400
]
CRDC_00555 (dnaQ)
Enzymes [BR:
cri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CRDC_00555 (dnaQ)
DNA replication proteins [BR:
cri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CRDC_00555 (dnaQ)
DNA repair and recombination proteins [BR:
cri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CRDC_00555 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DNA_pol_A_exo1
MATalpha_HMGbox
Motif
Other DBs
NCBI-ProteinID:
AGS06596
LinkDB
All DBs
Position
complement(93549..94112)
Genome browser
AA seq
187 aa
AA seq
DB search
MKRYIFLDVETTGLSPHKGDRVIEIGCVEVINGFITGRVFHSYFKTFTKISDDAYNIHGI
NQKFLKDKPLFGEKLDDLLGFISNSTIIAHNAKFDVNFIHYEINNCGGNIEHLHANCLFL
DSLEIFRKMFPRQKNDLDSLCKRYNVYFENIREKHTAILDAWLLSIIIIKMGFFDKKSYL
KNFNEYN
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatatatatttttagatgttgaaacaacaggtttatcaccacataaaggagat
agagttatcgaaattggttgtgtagaagtaattaatggttttataacaggaagagttttt
cattcttattttaaaacatttacaaaaatatctgacgatgcttataatatacatggaatt
aatcaaaaatttttaaaagataaacctttatttggtgaaaaattagatgatcttttgggt
tttattagtaattctactataattgctcataatgcaaaatttgatgtaaattttattcat
tatgaaataaataattgcggaggaaacatagagcatttgcatgctaattgcttattttta
gattctttagaaatttttagaaaaatgtttcctagacaaaaaaatgatttagattcttta
tgtaaaagatataatgtatattttgaaaatattagagagaaacatacagctattttagat
gcttggttactttctataataattataaaaatgggttttttcgataaaaaatcttattta
aaaaattttaatgaatataattaa
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