Candidatus Carsonella ruddii DC: CRDC_00835
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Entry
CRDC_00835 CDS
T02774
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cri
Candidatus Carsonella ruddii DC
Pathway
cri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CRDC_00835 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cri03021
]
CRDC_00835 (rpoA)
03400 DNA repair and recombination proteins [BR:
cri03400
]
CRDC_00835 (rpoA)
Enzymes [BR:
cri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CRDC_00835 (rpoA)
Transcription machinery [BR:
cri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CRDC_00835 (rpoA)
DNA repair and recombination proteins [BR:
cri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CRDC_00835 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AGS06651
LinkDB
All DBs
Position
complement(140069..141031)
Genome browser
AA seq
320 aa
AA seq
DB search
MKKDRIFFLNKISFKKISVFRNLIKIEFFNNSFIDSLGNFIRRTIFLTNYGYKISYIKFF
NVNSEYSNLKGVKENTYEIISNLNNILFKIKNEIFAYLIIKKNGPCIVTAKDIFSDKKVI
ILNPNIVIANITGNVLFYIVMKCSLSSYTLNDLNFKEKFFKSKIIKLNFINSVIKNVNYF
IHKKVYNKNIKTLFFDIETNGTLDPEMCFRNCIFFIKKYFDVLFSIIGVKKKYIEIKKRK
KFLKINPVLIRSIDNLEISIHTSNVLKRNNIYLIGDLIKQSEQSLINLRFMNKSVYLEII
EALNNKNLPLNMKIKYEIQY
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagatagaatcttcttcttaaataaaataagttttaaaaaaatttctgttttt
agaaatttaataaaaattgaattttttaataattcttttatagattctttaggaaatttt
ataagaagaacaattttcttaactaattatggatataaaatttcttatataaaatttttt
aatgttaattcagaatattctaatttaaaaggtgtaaaagaaaacacttatgaaataatt
tcgaatttaaacaatattttatttaaaattaaaaatgaaatttttgcatatttaataata
aaaaaaaacggtccttgtatagtaacagctaaagatattttttcagataaaaaagttatt
attttaaatccaaatattgtgattgctaatattaccgggaatgtgttgttttatatagtt
atgaaatgtagtttaagtagttatactttaaatgatttaaattttaaagaaaaattcttc
aaatcaaaaataattaaacttaattttattaattctgttattaaaaacgtaaattatttt
atacataaaaaagtgtataataaaaatattaaaactttattttttgatatagaaactaat
ggaacattagatccagaaatgtgttttagaaattgtattttttttataaaaaagtatttt
gatgtattattttctataataggggttaaaaaaaaatatatagaaattaaaaaaagaaaa
aaatttttaaaaataaatcctgttttaataagatctatagataatttagaaattagtata
catacgtcaaatgttttaaaaagaaataatatttatttgataggagatttaataaaacaa
tcagaacaaagtttaattaatttaaggtttatgaataaaagcgtatatttagaaataata
gaagcattaaataataaaaatttaccattaaatatgaaaataaaatatgaaatacaatat
tag
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