Chroicocephalus ridibundus (black-headed gull): 134507690
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Entry
134507690 CDS
T10910
Symbol
DHX34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crid03019
]
134507690 (DHX34)
Enzymes [BR:
crid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134507690 (DHX34)
Messenger RNA biogenesis [BR:
crid03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
134507690 (DHX34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
134507690
NCBI-ProteinID:
XP_063174575
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All DBs
Position
26:144419..156122
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AA seq
1229 aa
AA seq
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MPREKESGCRRRGERDRSPSRWEGDWDWDCPATRRRLQELYFPERDSSGAGSEEILNFWA
FFERLRRFQSRRTHPAPPPGHRHAAEPPAATAARLDLPPAYDPRYRINLALPSAAAVPTR
NSDLPRERLAEFRAAVLHYLDFTQKQSFAKLAKLHRERAALPIAQYRQRLLDAVAGNQVV
VVAGDTGCGKSTQVPQYLLAAGYSHVACSQPRRIACVSLAKRVAFESLHQYGDQVGYQIR
FESTRSPATKIVFLTEGLLLRQVQREPALPGYHVLIADEVHERHLHSDFLLGVLRRLLPS
RPDLKLVLMSATINIRLFSGYFGGAPVLQVPGRIFPISVIYQPIPKEEASPAGKWGKSER
LDPLPYLRVLQAIDHKYPPEERGDLLVFLSGVAEIGAVLEAAQAYAARTQRWIVLPLHST
LSVAQQDKVFDVPPPGVRKCILSTNIAETSVTIDGVRFVLDSGKVKEMSYDPQGKLQRLQ
EFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDALVLQLKSMG
LGDPRTFPFLEPPPSSSLETAVRYLRDQGALDEAEDLTPIGNLLAQLPVDVVVGKMLVLG
ALFGLAEPTLTVAAALSVQSPFLRSAHPNPDCATARRPLESPHGDPLTLLNVFNEWVQVK
SERSGSSRKWCRRRGLEEHRLYEAANLRRQFQELLRDHQLLEEGSSQPSDSYSRQSRHRE
RRELHRLWRSHAETEGRKRKVLRLQDGADASSGEEEEGGGNREKGERSIDIQDVKFKLRH
NVEELQAVSSSVLSSSQLALLKLVLCRGLYPQLAVPDQLNSGRKDSDQIFHTKTKQGVVL
HPTCVFATSPELLHAKEGPERGGTKDPAEGLSHRHQLLAFVSLLETNKPYLVNCVRVPAL
QVSSLLPSSSSPRAFVTPHWSCFAPPGSPPLLPVAGHQRRLRPAGGRRVAGGHRPRRGLC
PAPALRGPAASFRLGKTPPSTAGRSRRGIEPPAELPGRIRAHPGAAGLPADEGAVSPAPA
HRPGETEPLRRSPDGGRRSPPPGALPGDGDEARRGERRPQGDRFPHLQLLGHGHGPLQRL
PAELLDLSPLRPPHALHPPGAHVSRKRLPAPRGPPGRTIGKLFQNLRPAPLLPLRPLPAG
FYLHPHGNPPAQETAPITGARRDAPAGRCRAPRCRDPPPSLGDPRNWGGSPRPPPPNYLR
CFWLGFAFQDANGRWVPDSRATRDFTFST
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggagaaggagagcggatgccggcgacgaggagagcgggaccgttccccttcc
cggtgggagggggactgggactgggactgtcccgccacgcgccgccgcctgcaagagctc
tatttccccgagcgggattccagcggcgccggctccgaagagatcctgaatttctgggct
tttttcgagcgtctccggcgtttccaaagccgcagaacccaccccgcgccgccacccggc
caccgccacgcggcagagccccccgccgccaccgccgcccgcctcgacctgccccccgcc
tacgacccccgttaccgcatcaacctcgcgctgccgagcgccgccgccgtccccacccgg
aattccgacctaccccgggaacgcctcgccgaattccgcgccgccgtcttacactacctg
gatttcacccaaaaacaaagcttcgccaaactggccaaactccaccgggaacgagccgcc
cttcccatcgcccagtaccggcagcgtttactggacgccgtggccggcaaccaagtggtg
gtggtggccggcgacaccggctgcgggaaatccacgcaggtgccgcagtacctgctggcg
gccggttacagccacgtggcttgtagccaaccccgccgaatcgcctgcgtctcgctggcc
aagcgggtggccttcgagagcctgcaccagtacggggaccaggtgggctaccagatccgc
ttcgagagcacccgctcgcccgccaccaagatcgtcttcctgacggaggggctgctgctg
cggcaggtgcagcgggagccggcgctgccggggtaccacgtcctcatcgccgacgaggtt
cacgagcggcacctccacagcgatttcctcctgggcgtcctgcgtcgcctcctgccctcc
cgccccgacctgaagctggtcttgatgtcggccaccatcaacatccgccttttttcgggt
tatttcgggggggccccggtgctgcaggtgccgggaaggattttccccatctcggtcatc
taccaacccatccctaaggaagaagcatccccagcgggaaaatgggggaaatcggagcgt
ctggatcccctcccgtacctgcgggtgcttcaagccatcgaccacaagtacccgccggag
gagcgcggggacctgctggtgttcctgagcggggtggccgagatcggggcggtgctggag
gcggcgcaggcttacgccgcccgcacccagcgctggatcgtcctccccctgcacagcacc
ctctccgtggcccagcaggacaaggtgtttgacgtccccccgcccggcgtccgtaagtgc
atcctctccaccaacatcgccgagacttcggtgaccatcgacggcgtgcgctttgtgctg
gattccgggaaggtgaaggagatgagttacgaccctcagggcaaactccagcggctgcag
gagttttggatcagccgggcaagcgccgagcagcggaaaggacgcgcgggcaggaccggc
cccggcgtctgctaccgcctttacgccgaatccgactacgacgccttttctccttacccc
gtgccggagatccagcgggtagcgcttgacgctctggtgctccagttaaagagtatgggg
ctgggcgaccctcggaccttccccttcctggagccccctccctcgtccagcctggagacg
gccgtgcggtacctgagggaccagggagccctggacgaagctgaagacctgacgcccatc
gggaacctcttggcccagctgccggtggacgtggtggtcggtaagatgctggtcctgggc
gctctcttcggcctggccgagcccaccctgacggtggcggcggcgctgagcgtgcagtcc
cccttcctgcgatccgctcaccccaatcccgactgcgccacggcccggcggcccctcgag
agcccccacggcgaccccctgacgctgctcaacgtcttcaacgagtgggtccaggtgaag
tcggagcggagcggcagctctcggaaatggtgccggcggcgaggtttggaggaacatcgg
ctttacgaagccgccaacctgcggcgccagtttcaggagctcctccgtgaccaccagctg
ctggaggaaggctccagccagcccagcgacagctacagccggcagagccggcaccgggaa
cgccgggagctgcaccgcctctggcgttcccacgcggagacggaaggtcggaagcgcaag
gtgctgcggctgcaggacggagcggacgcctcctccggcgaggaggaggagggtggtggg
aaccgtgagaaaggggagcgcagcatcgatatccaggacgtcaagtttaagctgcgtcac
aacgtggaggagctccaggccgtatccagctcggtcctctcctcctcgcagctcgccctg
ctcaaactggtgctgtgccgggggctttacccccagctggccgtgcccgaccagctcaac
agcggccgtaaggattccgatcagatttttcacaccaaaaccaagcagggggtcgtcctt
catcccacctgcgtcttcgctaccagcccggagctgctccacgccaaggagggaccggag
cgcggtgggaccaaagaccccgcggaggggctgagccaccgccaccagctcctcgccttt
gtctcgctgctggagaccaacaagccctacctggtgaactgcgtccgggtgccagccctg
caggtgagctctctgctcccctcctcttcctctccgcgagccttcgtcaccccacactgg
tcgtgttttgctcctccaggctctcctcctcttctcccggtcgctggacaccagcgccga
ctgcgcccggctggtggccgacgggtggctggaggtcaccgtccccgacgcggactctgc
cctgcgcctgctctccgcggccctgcagcttcgttccgcttgggaaaaactcctccatca
actgctggaaggtcgaggagaggaatcgagcctccggccgagctcccgggacgtatccgc
gctcacccgggggctgctggacttcctgcagatgaaggtgccgtatcgcctgcgccagct
caccggcctggagaaacagaacctctacgtcggtccccagacggtggccgccgctccccg
cctcccggggctcttccaggggacggagatgaagcccgacgaggtgaaaggcggccacag
ggtgaccgatttcctcacctacaactgcttggccacggacacggacctctacagcgactg
cctgcggagcttctggacctgtccccactgcgacctccacatgcccttcacccccctgga
gcgcatgtgtcacgaaagcgcttgccggccccccgaggcccccccggaagaaccattgga
aaactcttccaaaatctccgccctgcaccgctcctaccactgcgacctttgccagcggga
ttttaccttcacccccacggaaatcctccggcacaagaaacagcaccaataaccggggct
cgtcgggatgctcccgccggccggtgccgagcaccgcgatgccgggatcctcccccatcc
ctcggggacccccgtaactgggggggatccccccgccccccccccccaaactacctccgc
tgcttttggctgggttttgctttccaggatgccaacggccgttgggtccccgattcccgt
gccacgagggacttcaccttctccacctga
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