Chroicocephalus ridibundus (black-headed gull): 134507695
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Entry
134507695 CDS
T10910
Symbol
HIF3A
Name
(RefSeq) hypoxia-inducible factor 3-alpha
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crid03000
]
134507695 (HIF3A)
Transcription factors [BR:
crid03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
134507695 (HIF3A)
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GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
HIF-1
PAS_4
PAS_9
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
134507695
NCBI-ProteinID:
XP_063174582
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All DBs
Position
26:1462974..1474984
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AA seq
631 aa
AA seq
DB search
MDGRPGARSTPELRKERSRDAARCRRSRETEVFYQLAHTLPFARGVSAHLDKASIMRLTI
SYLRVHRLLAAGAWAAAAEEVDGCYLKALSGFVMVLSEAGDMIFLSENVNRLLGLSQLEL
IGHSVFDFVHPCDHEELQDVLSPRQAVPRRRGERSGRSFSLRMKSTLTGRGRCLNLKAAS
WKVLHCAGHMRSYAGAGGGDPPLRCLVLICEAIPHPGAIETPLGSGTVLTRHSMDMKFTY
CDDRIGEVAGYTPEELLGCSLYEYVHALDSDTLSRSVHTLLSKGQAVTSQYRFLAKRGGF
LWAQTQATVIANSRSAQPEGIVCLTFVLSRVEQRGVVLSLEQTQRRGEGRRLPPPAPGPD
TPDAILNLSLGVGGPRVLAFLRPAHVPEAVLQRDPRRFCSPELARLLAPIFDPPPAPSRR
RPHSPSPPPGDELLFEVQKLFAGSPGPRTALQASPLDLAMLAPYIPMDGDFQLGGAEAPR
GRGPRPPGPAPSAAAPPPRPRARSFPGRGSAPSRPGPALPRWGSDPALGPALAPRPTRKR
ARELSGEDAGAPLKRPELDPHLLPPLGLGLLLSGEDPPGLSPSLGQEQPLALLADGLALP
GVPPHPTLGPPQEETEGHPGGPPRGACLGSN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcggcccggggcgaggtcgacaccggagctgcggaaggagcgctcgcgggac
gcggcccgttgccggcgcagccgggagaccgaggtcttctaccagctggcgcacaccctg
cccttcgcccgcggcgtcagcgcccacctggacaaggcctccatcatgcgcctcaccatc
agctacctgcgcgtccaccgcctcctcgctgccggtgcctgggcggcggcggcggaggag
gtggatgggtgctacctgaaggcgctgagcgggttcgtgatggtgctgagcgaggcgggc
gacatgatcttcctctccgagaacgtcaaccggctcctggggctcagccagctggagctg
atcggccacagcgtctttgacttcgtgcacccctgtgaccacgaggagctgcaggacgtg
ctcagcccccggcaggcggtgccgcggcggcggggggagcgctcagggcgcagcttctcc
ctgcggatgaagagcaccctgacggggcgcgggcgctgcctcaacctcaaggcagcctcc
tggaaggtgctgcactgcgcgggccacatgcggtcgtatgcgggggccggggggggcgac
ccccctctgcgctgcctggtgctgatctgcgaggccatcccccacccgggggccattgag
acccccctgggctccggcaccgtcctcacccgccactccatggacatgaagttcacctac
tgtgacgacaggatcggggaggtggcggggtacacccccgaggagctgctcggctgctcc
ctctacgagtacgtccatgccctcgactccgacaccctcagcaggagcgtgcacaccctg
ctgagcaagggccaggcggtgacgagccagtaccggttcctggccaagcgcggggggttc
ctgtgggcgcagacccaggccaccgtcatcgccaacagccgcagcgcccagcccgagggc
atcgtctgcctcaccttcgtcctcagccgtgtggagcagcggggggtggtgctgtcgctg
gagcagacccaacgccggggggaagggcgccgcctgcccccccccgcccccggccccgac
acccccgatgccatcctcaacctcagcctcggggtggggggcccgcgggtgctggctttc
ctgcgcccggcccatgtccccgaggcggtgctgcagcgggacccccggcgcttctgctcc
cccgaactcgcccgtctcctcgcccccatcttcgacccccccccagcaccctcccgccgc
cgcccccacagcccctccccgccccccggggacgagctgctgttcgaggtgcagaagctt
ttcgcggggagcccggggccccgaacggccctgcaggcgtcgcccctggacctggccatg
cttgccccctacatccccatggacggcgacttccagctgggcggggccgaggcgccgcgt
gggcggggcccgcgcccacccggccccgccccctcggccgcggccccgccccctcggccg
cgcgcccgcagcttccccgggcgcggctccgccccctcccggcccggccccgccctcccg
cgctggggcagcgaccccgccctcggccccgccctggcgccccgccccaccaggaagagg
gcacgggagctgagcggggaggacgcgggggcccccctgaagcgccccgagctcgacccc
cacctgctgccccccctcggcctggggctgctgctgagtggggaggaccccccgggactg
agcccctccctggggcaggagcagcctctcgcgctgctggctgatggcctggccctgccg
ggggtccccccgcaccccaccctggggcccccccaggaggagaccgagggccacccagga
ggacccccccggggtgcatgtctggggagcaactga
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