KEGG   Chroicocephalus ridibundus (black-headed gull): 134507716
Entry
134507716         CDS       T10910                                 
Symbol
ERCC1
Name
(RefSeq) DNA excision repair protein ERCC-1 isoform X1
  KO
K10849  DNA excision repair protein ERCC-1
Organism
crid  Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03420  Nucleotide excision repair
crid03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:crid00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    134507716 (ERCC1)
   03460 Fanconi anemia pathway
    134507716 (ERCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crid03400]
    134507716 (ERCC1)
DNA repair and recombination proteins [BR:crid03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     134507716 (ERCC1)
SSDB
Motif
Pfam: Rad10 HHH_5 HHH HHH_2
Other DBs
NCBI-GeneID: 134507716
NCBI-ProteinID: XP_063174634
LinkDB
Position
26:complement(1257673..1260132)
AA seq 313 aa
MEAAADPAPAGKRRRFTLRQEGPADPAVPSLFKPSAARPEPPPVLPPPPPGPSSYAEYVV
QQSAAPGAAEPLPASPRPSPAPEPDGPPEGGVPGGGGPGAVPPLPVLKPGAKSSGIVVSP
RQRGNPVLKFVRNVPWEFGDIVPDYVLGQSTCALFLSLRYHHLHPDYIHDRLRQLGRSYG
LQLLLVQVDVKDPHQALKELAKVCILADCTLLLAWSPEEAGRYLETYKAYEQKPPDLLKE
RVEQDFLSRMTDCLTSVKSVNKTDALSLLTAFGSLAAVVGASREDLSLCPGVGPQKAKRL
FDVLHEPFLKVPK
NT seq 942 nt   +upstreamnt  +downstreamnt
atggaggcggccgcagacccggccccggcggggaagcggaggcggttcacgctgcggcag
gagggtcccgccgaccccgcggtcccgtcgctcttcaaaccctccgcggctcgccctgag
ccccctcccgtgctccccccgccgcccccggggcccagctcctacgccgagtacgtggtg
cagcagtcggccgcccccggagccgccgaaccgctcccggcttcaccccggccctccccg
gcccccgagcctgacggcccgccggaggggggcgtaccgggcgggggcggccccggggcc
gtgccccccctgcccgtgctcaagccgggtgccaagagcagcggcatcgtcgtcagcccg
cggcagcggggcaacccggtgctgaagttcgtccgcaacgtcccctgggagtttggtgac
attgtccctgactacgtcctgggccagagcacctgcgccctcttcctgagcctgcggtac
caccacctccaccccgactacatccacgaccgcctgcggcagttgggcaggagctacggg
ctgcagctgctgctggtccaggtcgacgtgaaggacccgcaccaggcgctgaaggagctg
gcgaaggtctgcatcctggctgactgcaccctcctgctggcctggagccccgaggaggcc
gggcggtacctggagacctacaaggcctacgagcagaagccacccgacctgctgaaggag
cgggtggagcaggattttctctcccggatgaccgactgcctgaccagcgtcaagtcggtc
aacaagacggacgcgctgagcctcctcaccgctttcgggtcgctggcagccgtggtgggt
gcctccagggaggacctgtccctctgccccggcgtcgggccccagaaggccaagcggctc
ttcgatgtcctgcacgagcccttcctcaaggttcccaaatga

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