Chroicocephalus ridibundus (black-headed gull): 134507805
Help
Entry
134507805 CDS
T10910
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM39-like
KO
K12015
tripartite motif-containing protein 39 / bloodthirsty-related gene family protein [EC:
2.3.2.27
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crid04121
]
134507805
Enzymes [BR:
crid01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134507805
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134507805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_10
zf-RING_5
zf-RING_6
FlgK_D1
CIDE-N
RING_XB3-XBAT31
SelO
Motif
Other DBs
NCBI-GeneID:
134507805
NCBI-ProteinID:
XP_063174756
LinkDB
All DBs
Position
28:838792..844653
Genome browser
AA seq
568 aa
AA seq
DB search
MFISCLITFQPDRFSPGGKLSLPLCKPLGARFLLGRNGEKKKTKPKTQTPKLALTSLRAP
KHLQEKEEKKKKKKKKGSSQRARPAGAENESRPVIILAAETMAAAESPAESFRDEASCPV
CLGFFQDPVSIHCGHNFCRACITRCWEEAQENFACPRCKETAPQRNLRPNRELAKIIEIA
KRLSLQAARGGAGGEKLCEKHREALKLFCEEDQTPICLVCRESQAHRLHAVVPIEEAAEE
HKEKFQAHVQILKERREKLLGLKVAEEGKSLDFLERVEAERQKVVSEVKELCQFLEGQER
LLLDRLAKLDQEITRRQEENINRLLEEISSIGEQIRELEEKCQQPACEFLQDSRNILSRL
EKDGAQEPAETSPELGEKPTGLPAKNVALKEMLMKYRVSLTLDPETAHPRLVLSEDGKRV
RWEDTRQPLPDNPKRFDSSRCVLGCQGFTGGRHYWEVEVGDGEAWAVGVAKESVRRKGRI
SVNPKVGIWAVGQCGSQYQALTSPTVPISLLAAPKVIGIYLDYEAGRVAFFDSNNEAPIF
TYPPASFAGEQILPLLCLGRGCQFTLSP
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtttatttcctgtttaatcacttttcaacccgaccgcttttcccccgggggaaaactc
tcccttcccctctgcaaacccctcggcgcgaggtttttgctcggtcgcaacggggagaaa
aaaaaaacaaaaccaaaaacccaaacccccaaacttgctctcacctccctcagggccccg
aaacacctgcaggaaaaagaagaaaaaaaaaaaaaaaaaaaaaaaaaggggagcagccaa
cgggcaagaccagccggggcggaaaacgaaagccgccccgtcatcatcctcgctgccgag
accatggcagcagcagagagccccgccgaaagcttccgtgatgaagcctcctgccccgtc
tgcctgggcttcttccaagaccccgtctccatccactgcggccacaacttctgccgggcg
tgcatcacccgctgctgggaggaagcccaggagaatttcgcctgcccccggtgcaaagag
acggccccgcagagaaacctgagacccaaccgggagctggcaaagatcatcgagatcgcc
aagcggctgagcttgcaggcggccagaggaggggccgggggggaaaagctgtgcgagaag
caccgggaagctctgaaactcttctgcgaggaggaccagacccccatctgcctggtgtgc
agagagtcccaggcccaccggctccacgccgtggtccccatcgaggaggctgcggaggag
cacaaggagaaattccaggctcacgtgcagatcctgaaggagaggagagaaaaactgctg
gggctgaaagtggccgaggaagggaaaagcctggacttcctcgaaagggttgaagcggag
aggcagaaggttgtgtctgaagtcaaggagctgtgccagttcctggagggacaggaacgt
ctccttttggaccggctggcaaagctggaccaggaaatcacgaggagacaggaggagaac
atcaacaggctcttggaggagatctcctccatcggcgagcagatccgtgagctggaggag
aagtgtcagcagccagcgtgtgaattcctgcaggacagcagaaacatcttgagcaggctc
gagaaggacggtgcccaggagccagcagagacgtcgcctgagctgggagagaaacccacc
ggtcttcctgcgaaaaatgttgccctcaaggagatgctgatgaaatatcgagtgagtctg
acgctggatcccgagacggcgcatccccggctcgtcctctccgaggacggcaagcgtgtg
agatgggaagacacccgccagccccttcccgacaaccccaagcgcttcgactcctctcgc
tgcgtcctgggctgccagggcttcacgggggggaggcattactgggaggtggaggtgggc
gatggggaagcctgggccgtcggggtggccaaggagtcggtgaggaggaagggaaggatc
agcgtcaaccccaaggtggggatctgggcggtgggacagtgcgggagccagtaccaggct
ctcacctctccgaccgtccccatctccctgctcgctgcccccaaagtcatcgggatttac
ctggactacgaagcggggcgagtggcatttttcgattccaacaacgaggcccccatcttc
acctacccgccggcatcctttgccggggagcaaatcctccccctgctctgcctggggagg
gggtgccagttcacgctctccccctga
DBGET
integrated database retrieval system
