Chroicocephalus ridibundus (black-headed gull): 134507814
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Entry
134507814 CDS
T10910
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03320
PPAR signaling pathway
crid04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
134507814 (RXRB)
03320 PPAR signaling pathway
134507814 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crid03000
]
134507814 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
crid03310
]
134507814 (RXRB)
Transcription factors [BR:
crid03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
134507814 (RXRB)
Nuclear receptors [BR:
crid03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
134507814 (RXRB)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
134507814
NCBI-ProteinID:
XP_063174769
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Position
28:complement(227235..238515)
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AA seq
500 aa
AA seq
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MPGAARGIVGRWGPQAAAPGAGRARGGAAAVAAAAGGGGVGRSERPEPPRQRGMGDSDRD
CRSPDSSSLSASPPPPEPSAPLHPPSMIGSAMTSSLNSPGAALGSPFPVISSSMGSPGLP
ATPAIAYGPVSSPQINSTVNLSGLHPVSSSDDVKPPLGIRAVPCHPHGPGVAGKRLCAIC
GDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCVVDKRQRNRCQYCRYQKCLAT
GMKREAVQEERQRGKEKEGDGDLGVNANEEMPVEKILEAELAVEQKSDQNVDGSGGSSPN
DPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSISVKD
GILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKG
LSNPAEVELLREKVYASLESYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLI
GDTPIDTFLMEMLEAPHQLS
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgccgggagccgcgcggggcattgtggggcggtggggcccgcaggcggcggcgcccgga
gcaggccgagcccgggggggggcggcggcggtggcggcggcggcggggggggggggggtc
ggtcggtccgagaggccggagcccccccggcaacgcgggatgggcgacagcgaccgcgac
tgccggagccccgatagctcatccctgagcgcctccccgccccccccggagccgtcggcc
cccctgcaccccccctccatgatcggctcggccatgacctcctccctcaactctcccggc
gccgccttgggctcccccttccccgtcatcagctcctccatgggttccccgggcctcccc
gccacccccgccatcgcctacggccccgtcagcagcccccagatcaactccacggtcaac
ctctcggggctgcaccccgtcagcagctcggatgacgtcaagccccccttggggatccga
gccgtcccgtgtcacccccacggccccggcgtggccggcaaacgcctctgcgccatctgc
ggggatcgctcctcagggaagcattatggggtgtacagctgcgagggttgcaagggcttc
ttcaaacggaccatccgcaaggacctgacctacacttgccgcgacaacaaggactgcgtg
gtggacaaacgccaacgcaaccgctgccagtactgccgctaccagaagtgcctggccacc
ggcatgaagcgggaagccgtgcaggaggagcgccagcggggcaaggagaaggaaggcgat
ggcgacttgggggtcaacgccaacgaggagatgccggtggagaagatcttggaggccgag
ttggcggtggagcagaaatcggaccaaaatgtggacggcagcgggggcagctcgcccaat
gacccggtgaccaacatctgccaggccgccgacaagcagctcttcaccctggtggagtgg
gccaagaggatcccccatttttccgacctgcctttggacgaccaagtcatcctcctgcgg
gcgggctggaacgagctgctcatcgcctcattctcccaccgctccatctccgtcaaggac
ggcatcctcctggccaccggcctccacgtccaccgcaacagcgcccacagcgccggcgtg
ggggccatcttcgacagggtgctgaccgagctggtctccaagatgcgggacatgcggatg
gataagacggagctgggttgccttcgcgccatcatcctcttcaatccggacgccaagggc
ctttccaaccccgccgaggtggagctgctgcgggagaaggtttacgcttccttggaatcc
tactgcaagcagaagtatccggagcaacagggcaggttcgccaagctgctcctgcgcctg
ccggccctgcgctccatcggcctcaaatgcctggagcatcttttcttcttcaagctcatc
ggggacacccccatcgacaccttcctcatggagatgctcgaagccccccaccagctctcc
tga
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