Chroicocephalus ridibundus (black-headed gull): 134507886
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Entry
134507886 CDS
T10910
Symbol
SLC6A13
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2 isoform X1
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134507886 (SLC6A13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crid02000
]
134507886 (SLC6A13)
Transporters [BR:
crid02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
134507886 (SLC6A13)
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Motif
Pfam:
SNF
ABHD16_N
Motif
Other DBs
NCBI-GeneID:
134507886
NCBI-ProteinID:
XP_063174939
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Position
1:153930176..153969586
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AA seq
653 aa
AA seq
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MQNTVSTDSRILPHKQPRHKSEASTALQASSGDRVFLASGFWSLFGGAMDCRVPGAVSNG
EMVPTQPSMEKEKEKEEEDQTLERGQWNNKLEYVLSVAGEIIGLGNVWRFPYLCYKNGGG
AFFIPYLIFLFTCGIPVFFLETALGQYTSQGGVTAWRRICPLFEGIGYASQVIVILLNFY
YIIVLAWALFYLFSSFTIDLPWGSCDHEWNTGNCMELQKANSTLNVTNENATSPVIEFWE
RRVLKISDGIQHLGSLRWELALCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLIVL
LIRGVSLPGASQGILFYLYPDLSRLGDPQVWMDAGTQIFFSYAICLGCLTALGSYNKYHN
NCYRDCVALCFLNSGTSFVAGFAIFSILGFMAEEQGVPIAEVAESGPGLAFIAYPRAVVM
LPFSPLWACFFFLMVVLLGLDSQFVCVESLVTALVDMYPTIFRKKNRRETLILLVSVLSY
LVGLVMLTEGGMYVFQLFDYYAASGMCLLFVAIFETLCIAWVYGAERFYDNIEDMIGYRP
WPIIKYCWLFITPAVCMATFLFSLIKYTPLTYNKKYVYPWWGDTLGWLLALSSMVCIPLW
IVYKLSTIKGSLRERLRQLTCPLEDLPSRLGTGQPLPSTRAGLLMLTELESHC
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacacggtgtccacagacagtcgtatcttgccccacaagcagcccaggcacaaa
agtgaggcctccactgctctgcaggcatccagtggggacagggtttttcttgcatcagga
ttctggtcattatttggaggtgcgatggattgcagagtccctggagccgtcagcaatggt
gaaatggtgcccacacaacccagcatggaaaaagagaaggagaaggaggaggaggaccag
accctggagcgagggcagtggaacaacaagctggagtacgtcctgtccgtggctggggag
atcatcggcctgggaaatgtctggcgcttcccctacctctgctacaagaatggtggaggt
gccttcttcatcccctacctcatcttcctcttcacctgcgggatccccgtctttttcctg
gagacggcgctggggcagtataccagccagggaggggtgacagcctggcgcaggatctgc
cccctcttcgaaggaattggctacgcctcacaggtcatcgtcatactgctgaacttctac
tacatcattgtcctggcctgggccttgttttatctcttcagttcgttcaccatcgacctc
ccttggggcagctgtgaccacgagtggaacacagggaactgcatggagctccagaaggca
aactcaacactcaatgtgaccaatgaaaatgccacctcccctgtcatcgaattctgggag
aggagagtactaaagatttccgatggcatccagcacctgggcagcctgcgctgggagctg
gctctgtgtctcttactggcgtggatcatctgttacttctgcatttggaaaggggtcaag
tccacaggcaaggtggtgtatttcacggccacgttcccatacctcatgctgatcgttctg
ctgatcaggggagtctccctgcccggggcatcccagggaatcctgttttacctttatcca
gacctcagtcgtcttggggacccccaggtctggatggatgcaggcactcaaatcttcttt
tcgtatgcaatttgtctgggatgcctgacagctctgggcagctataacaaataccataac
aactgctacagggactgcgtggccctctgcttcctcaacagcggcaccagcttcgtggcc
ggctttgccatcttctcaatcctgggcttcatggcggaggagcagggtgtgcccatcgct
gaggtggccgaatcggggcctggcctggcattcatcgcctaccctcgggctgtggtcatg
ctgcccttctccccgctctgggcgtgtttcttcttcctgatggttgttttgctgggactg
gacagccagtttgtctgcgtggagagcctcgtcacagctcttgtggacatgtaccccacc
atcttccgcaagaagaaccgccgggagaccctcatcctgctggtctccgtcctctcctat
ctggtcgggttggtgatgctcacagagggtgggatgtatgtcttccagctctttgattac
tatgctgccagtggcatgtgcctgctctttgtggccatcttcgagactctctgcatcgcc
tgggtctatggtgctgagcgtttctacgataacattgaagatatgatcggctaccggcca
tggcccatcatcaaatactgctggcttttcatcaccccggcagtttgcatggcaaccttc
ctattttctctcatcaaatacaccccgctgacctacaacaagaagtatgtgtacccgtgg
tggggggacaccctgggctggttgctggccctctcctccatggtgtgcatccctctctgg
atcgtctacaaactctccaccatcaaaggctccctcagagagaggctccgccaactcacc
tgcccacttgaggacttgccttccaggctgggcacaggacagccccttccctccaccaga
gctggcctcctgatgctgacagagctcgaatctcattgctag
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