| Entry |
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| Symbol |
NCBP1
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| Name |
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
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| KO |
| K12882 | nuclear cap-binding protein subunit 1 |
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| Organism |
crid Chroicocephalus ridibundus (black-headed gull)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:crid00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134508356 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
134508356 (NCBP1)
03015 mRNA surveillance pathway
134508356 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:crid03019]
134508356 (NCBP1)
03041 Spliceosome [BR:crid03041]
134508356 (NCBP1)
Messenger RNA biogenesis [BR:crid03019]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
134508356 (NCBP1)
Spliceosome [BR:crid03041]
Common components
Common spliceosomal components
Cap binding complex
134508356 (NCBP1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Z:complement(16337220..16368086)
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| AA seq |
794 aa
MSRRRHSDDSDGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLEADL
PNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMY
NEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRCDWYMFAFLSSLPWVG
KELYEKKDAEMDRLLSQTESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWSQIQKLKK
DRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEGP
VMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAELFQ
LPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHL
SNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSPANP
VCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDDEGFTFNP
LKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQMI
AVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIHKELEE
TKARLARQHKRRDSDDDDDDDDRSSDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQR
FIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDH
HILAVFQQFCALQA |
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| NT seq |
2385 nt +upstreamnt +downstreamnt
atgtcgcgacggcggcacagtgacgacagcgatgggcagccccacaagaggcggaggacg
tctgagccgtcggagatcgaggagaggctcgagtcgctcatctgcagggtgggagagaag
agtaattcatctttggagagcaacttggagggtctagctggtgttttggaagctgatctg
ccaaattacaaaagcaagatactccgaatactgtgtactgttgcacgtctgttaccagaa
aagcttactgtttacacgacactagttgggttgctgaatgccagaaactacaattttggt
ggggaatttgtagaagccatgattcgtcagcttaaagaatgtctgaaagtcaatatgtat
aatgaagctgtgcatttagttcgttttctgtcagatcttgtgaattgtcatgtaatagct
gcaccttcaatggtagctatgtttgagaactttgtgagtgtgacacaggaggaagatgta
ccccaagtacgatgtgactggtatatgtttgcatttctgtcatctttgccttgggttgga
aaggagttatatgagaaaaaggatgctgaaatggatcgtctcttgtctcagacagaaagc
tatttgaaacgccgccaaaagattcacgtacccatgctgcaagtttggactgctgataaa
ccacatccacaggaggagtatttagactgcctttggtctcagattcagaagttgaaaaaa
gaccgttggcaagaacgacacattctgaggccctacttggctttcgacagcattctttgt
gaagcgctgcaacacaatttgcctccgttcactcctccgcctcacactgaagattcagtg
tacccgatgccaagggttatttttaggatgtttgactacacggatgaccctgagggcccc
gtcatgcctggcagccactctgttgaacgatttgtgatagaagagaaccttcactgcatc
atcaaatcacactggaaagagagaaagacttgtgctgcacagctgttgagctatccagga
aacaacaagatccctttgaactaccacatcgtagaggtaatatttgcagaattgttccaa
cttccatctccaccacacattgaagtcatgtacacaacactcctgattgaactgtgcaaa
cttcagcctggctctttaccacaagttcttgcacaggccacagaaatgctctacatgcgt
ttggatacaatgaatacaacatgtgtggacagatttattaactggttttcccaccacttg
agcaacttccagttccgttggagctgggaagattggtcagattgtcttactcaggacctt
gaaaagcccaaacccaaatttgtgagagaggttttggagaagtgcatgcgactctcctat
catcagcgaataatagacattgttcctgcaagtttttctgtcctcagtcctgctaatcca
gtatgcatttacaagtatggagatgaaagtaatagatctcttcccggatatactgtggca
ctctgtttaacaatcgcaattaaaaataaggccagtaatgatgaaatcttcagcatttta
aaagatgtgcctaatccaaaccaggatgatgatgatgatgaaggatttaccttcaaccct
ctgaaaatagaagtctttgttcagactctgctccatctagctgcaaagtctttcagccac
tctttcagtgccctggcaaagtttcatgaagtcttcaaaacgcttgctgaaagtgatgag
gggaaactccatgttctgagggttgtatatgaggtttggaagaatcatccacagatgatt
gctgtgcttgtggacaagatgattcggacacaaattgttgactgtgctgcagtagcaaac
tggatcttctcttcagagcttgcacatgattttactaggttttatatctgggagatctta
cattccacaattcgtaagatgaataagcatgttctgaagattcacaaagaactggaggag
actaaggcaagattggccaggcagcacaaaagacgagacagtgatgatgacgatgacgac
gacgaccgaagcagcgatcgggaagatggaccactagaagagcagatagagcgcttgcag
gagaaagtagagtcagcccagagcgagcaaaagaatctcttccttgttatattccagcgt
ttcattatgttgttaactgagcacttagtgcgctgtgaaaccggtggaattgatgtattt
acaccttggtacaagagctgtatagagaggctgcagcagatcttcctgcagcatcaccag
ataatccagcagtacatggtgaccctggagaacctcctgtttacagctgaactggaccac
cacatactggctgtgtttcagcagttctgtgctctgcaggcctga |
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