Chroicocephalus ridibundus (black-headed gull): 134508531
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Entry
134508531 CDS
T10910
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
crid01001
]
134508531 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crid04121
]
134508531 (TRIM24)
Enzymes [BR:
crid01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134508531 (TRIM24)
Protein kinases [BR:
crid01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
134508531 (TRIM24)
Ubiquitin system [BR:
crid04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134508531 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
134508531
NCBI-ProteinID:
XP_063176381
LinkDB
All DBs
Position
1:158110037..158173180
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AA seq
1055 aa
AA seq
DB search
MEEAAAAAAAAAVAAAAAGGPCPADRTGAATALSGENEAESRQGPAERGGEAAPLNLLDT
CGVCGQPIQSRRPKLLPCLHSVCLRCLPQPDRYLMLPPAIPPSAAATGTPKEPQPPAPPS
SPVSSPASPMHCTPVGVIRCPICGQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCE
DNAEANGFCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPYHK
KEQLKLYCETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIETLITKLMEKTKYIKYT
GKQIQNRILEVNQNQKQVEQDIKVAIFTLMVEINKKGKALLHQLETLAKEHRMKLLQQQQ
EVAGLSKQLEHVMNFSKWAVSSGSSTALLYSKRLITYRLRYLLRARCDASPVTNNTIQFH
CDPSFWAQNIFNLGSLVIEDKETPPHMPKSPVMETNLQPPGSLPSNQLSKFPTQISLAQL
RLQHMQQQVMAQRQQAQRRAGPVGLPNPRMPGAMQQPPASHQAPPRLIHFQNHSPKSNGS
ALPAQQMRFPQHQNLPRQAVKPNPLQMAFLAQQAIKQWQIGSGQTSTPLSTASSTTSTPS
SPTVTSAVGCDGKTYGPPVIDLSSPVGSSYNLPSLPDIDCSGNITLDNVVRKDGTAEQNQ
PKPPSNRTVQSPNSSVPSPGLSGGVSVTNIHPPIRSPSASSVGSRESSGSSSRPPGADST
HKVPVVMLEPIRIKQESSASNENFDFPIVIVKQETDEESRPRNATFSRSILTSLLLDSNH
NSTSDEAVLRTDAPDSTDDQPGILQENTSSGKTGWIGPPHIGEGRKEDDPNEDWCAVCQN
GGELLCCEKCPKVFHLSCHVPTLKSFPSGEWICTFCRDLSKPEVEYDCDKPAHSSEKRKL
DDTVGLAPIDRRKCERLLLYLYCHEMSLAFQDPVPPTVPDYYKIIKKPMDLSTIKKRLEV
TNSYTKLEDFVADFRLIFQNCAEFNEPDSEVADAGMKLEAYFEELLSNLYPERKFPVQPS
CQSEKDNPELTDDSDDDFVQPRKKRLKGEDRQLLK
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggcggcggcggcggcggcggcagcagcagtggcggcggcggcggcggggggg
ccctgcccggcggatcgaacgggggcggcgacggcgctgagcggggagaacgaggccgag
agccgtcagggcccggcggagcgcggcggggaggcggcccccctcaacctgttggacact
tgcggcgtgtgcgggcagcccatccagagccggcggcccaagctgctgccctgcctccac
tcggtctgcctccgctgcctgccgcagcccgaccgctacctgatgctgccccccgccata
cccccctccgccgccgccaccggcacccccaaggagccgcagccgccggcgcccccttct
tcccccgtctcttcgccggcctcacccatgcactgcacgcccgtcggtgttatccgctgt
ccaatttgtggtcaggaatgtgcagagagacacatcatagataacttttttgtgaaggat
accacagaggttcccagtagcacagtagagaaatcaaatcaggtctgcacaagctgtgaa
gacaatgcagaagctaatgggttttgtgtggagtgtgtagaatggttgtgcaagacctgc
atcagagctcaccagagggttaaattcacaaaggatcatacagtaagacagaaagaggaa
gtatctccagaggcagttggtgtgaccagtcagcgacctgtgttttgcccttaccacaaa
aaggagcagttgaagttgtattgtgaaacctgtgacaagttgacctgccgagactgtcag
ttactagaacacaaagagcacaggtaccagtttatagaagaagcttttcagaaccagaaa
gtgatcattgagactctaatcaccaaattgatggagaagactaagtacataaaatataca
gggaagcagatccaaaacagaattcttgaagtgaatcagaatcaaaagcaggtggaacag
gatattaaagttgccatatttacactgatggtagaaataaacaaaaaggggaaagctctg
ctgcatcagttggagactctggctaaagagcatcggatgaaacttctgcagcaacaacag
gaagtggcaggtctctctaaacagctggaacacgtcatgaatttttccaaatgggcagtt
tccagtgggagcagcacagcactactgtacagcaaacgcttgattacatatcgactacgg
tatcttctccgagcaaggtgtgatgcttcaccagtgacaaacaataccatccagtttcac
tgtgatcctagcttctgggctcaaaatattttcaatctaggttctttggtaattgaagat
aaggaaaccccaccacatatgcccaagagccctgtgatggaaacaaacttacagccgcca
ggcagcttaccttcaaaccagctatctaagttcccaacgcagataagcttagctcagctc
cgactccagcacatgcagcaacaggtcatggctcagcgacagcaagctcaacgcagagca
ggtccagtaggtttaccaaatccaagaatgccaggagccatgcaacaacctcctgcttct
catcaggcacctccgcgcttgattcattttcagaaccatagccccaagtccaatggttca
gctctccctgcacaacagatgagatttccccaacatcagaacctaccaaggcaagcagta
aagcccaacccattgcaaatggcattcttggcacagcaagctataaaacagtggcagatc
ggcagtggacaaacttcaactcccctttcaactgcaagcagcacaacatctactccatcc
agccccacagtcacgagtgctgtaggatgtgatgggaagacgtacggtcccccagtgata
gatctgagttctccagtgggtagctcctacaatctaccatctcttcctgatattgattgt
tcaggaaacatcacactggataatgttgtacggaaggatggcactgcagagcagaatcag
ccaaaacccccttcaaacagaaccgtgcagtcaccaaattcatcggtaccatcgccaggc
ctctcaggaggagtcagtgtgacaaacatacaccctccaatccgttcacccagtgcctcc
agtgttggcagcagagagagttctggctcctccagcaggccaccaggagctgattctaca
cataaagtcccagttgttatgttggagccgatcagaattaaacaggagtcaagtgcatca
aatgagaactttgatttcccaattgttatagtgaagcaagaaacagatgaggaatcccgg
cctcggaatgccaccttttcaagaagcatccttacttcattgctgttagatagcaatcat
aattccacttctgatgaagctgtcttaagaacagatgcgccggacagcacagatgatcaa
ccagggatactgcaggagaacacatccagtgggaagacaggatggataggcccaccccat
ataggggagggcagaaaagaggatgatcccaatgaggattggtgtgccgtatgtcaaaat
ggaggggagctcctttgctgtgagaagtgtcccaaagtattccatctttcttgtcatgtc
cctacattgaagagctttccaagtggagagtggatttgtacattctgtcgggatttgtcc
aagccagaagttgaatatgactgtgataaacccgctcacagctctgaaaaaagaaaattg
gacgacactgtgggtttggcgccaatagaccgtaggaagtgtgaaagactgctgctatac
ctctactgtcatgaaatgagtcttgcttttcaagatccggttcctcccacagttcctgat
tactacaaaataatcaaaaagcctatggacttgtcaaccatcaagaaaagacttgaagtg
accaattcatatacaaagctggaagattttgtggctgatttcagactgattttccaaaac
tgtgctgaatttaatgagcctgattcagaagtggccgatgccggcatgaaacttgaagcg
tactttgaagaacttctaagcaacctttatcctgagagaaagttccctgtacaacccagc
tgccagagtgaaaaagataatccagaacttactgatgactcggatgatgactttgtgcag
ccccggaaaaaacgcctcaaaggagaagaccgtcagttgcttaaatga
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