Chroicocephalus ridibundus (black-headed gull): 134508534
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Entry
134508534 CDS
T10910
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crid04131
]
134508534 (DENND4C)
Membrane trafficking [BR:
crid04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
134508534 (DENND4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
134508534
NCBI-ProteinID:
XP_063176382
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All DBs
Position
Z:complement(49740197..49815599)
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AA seq
1953 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDTDTATLLDQEISRHETKSSGPKAPITDIAVIIKSAGETVP
EGYTCVEATPTALQANLNYGSLKSPELFLCYKRGRDKPPLTDIGVLYEGKERIISGCEVI
QATPYGRCANVNNSSASSQRIFITYRRAPPIRPQNSLAVTDICVIVTSKGETPPHTFCKV
DKNLNCGMWGSSVYLCYKKSVPASNSLAYKAGLIFRYPQENYESFPLSESVPLFCLPMGA
TIECWDPQTKYPLPVFSTFVLTCSSAEKVYGAAIQFYEPYPRELLTEKQQLQLGLLTAVE
RKVVTSKSINSNKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNIPF
PSPQRPRILVQLSAHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLEGKI
LLHSLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLATVLSAPLPFIVGVDSRYFDLY
DPPQDIVCIDLDTNMVYISDDKKSTNWKQFPKKPCKSLLSTLKKLHPQLAAVHRKTQEGS
AVEMTPIEADFSWQKKMTELEMEIQEAFLRFMASILKGYRTFLKPITQAPSNKATAADSL
FDHQGFLKSRDRAYTKFYTHLTKTQIFSRFIEECSFVSDKDTGLAFFDDCIEKLFPDKGT
EKGEKVDVDSVEDARLIELDESQKSEHTVFIMPPEPPADDGQDRVPKYSYKNFPRLDFKL
FDRPQELKLSFSRHPAGSSISNSPALMAKRTKQEIKTAHKLAKKCYVSPPQWAKCLFSHS
YSLWFICLPAYIRVAHPKVKALQQAYDVLIKMRKTDVEPLDEVCYRVVMQLCGLWGQPVQ
AVRVLFEMKNAGIQPNAITYGYYNKAVLESPWPSSNRSGIFLWTKVRNVVRGTAQFRQCL
KKSTQSPRVPVISALRSATGGSDGDMVSHGSVDSSNDANSGEHTLFVSDLVRLDSIDNHS
STGGQSDQGYGSKDELLRDDGDSLHVTDIQVEKDISSTAEDLIGEVCTEKSDEKQQLNIE
THSPTEPPAWGNSIVKVPSGIFDSSGRKSCGETGSSPLFITQDSVEDVVFGDVSPKKTSE
KGQKRQKLFSERSCSFSSESRAGMLLKKGSLDLHSKEIAIMMGADAKILTAAFSGAKTSP
CHMNKSHSFERIIDQQVSGISGTWSCVTESDWELEHRSSPVLEEPGEGQEHLENGRDENM
TTVEDVNLEQSAESKNQKTESKDATTKRNSFYGVVKPIEREDVEVGLDPLSLLATDSTQP
RHPEPEEKLVSPVAARNLADEIESYMNLKNPLGSNFPSMELHKPEREAEASGTLGHSQER
RSSLPLDPILPSPKSCENRRSPSVSRSKTFTGRPKQQTHPRVQKERSSSLTGLGRSSPHG
SLGSVVTTLSNLKLDNILSGPKMDVLKSGMKQAANVASKMWGVVTSAYSYSDDEEENNRP
DFNFPAGFEDSILGDNLSSRTGVPGLMTNELAQSTTSLGSSSSSGDAGRQHYSAGEVSFP
RSMKVLDSEKSEHSSSHNTSLSSIFQNYAMEVLMSSCSQCRACGALVYDEEIMAGWTADD
SNLNTTCPFCKSTFLPLLNVEFKDLRGSASFFLKQSTSGDSLQSGTLPLTTDPLEQKLLS
SPAVADLISFSDHPQSSHAIAEETCSAAEQSDAAEEQSKDTTTVKTSANNPPKRGVSLTR
SHSVGGPLQNIDLSQRPSHGISTVSLPNSLQEVVDPLIKRPNPLPVSVPYLSSLVLRKEL
ESLLENEGEQVIHTSKFINQHPIIFWNLVWYFQRLDLPSNLPGLILTSEHCNDGVQLPLT
SLAQDSKLVYIHLLWDNINLHQEPGEPLYISWRNLNSSEKRPSTVAEDQQETNTLLENIK
LSIQHNDVVKPINLLLQKVKPDVKRQRSFYREILFLSLVSLGRENIDIEVFDSEYRLAHK
NLPKDVLEKMQKIDAPPSSRVECCRKCFGAPLI
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggtccacgagtggctgactactttgtggtggcagggctcactgat
acagatactgcaaccctcctggaccaagaaataagtcgacatgaaacaaagtcatctggt
ccaaaggctccaattactgacattgctgtgataattaaatcagctggtgaaactgtccca
gagggatacacctgtgttgaagccacccctacagcccttcaagccaacttaaactatgga
agtctaaagagtcctgaactttttctttgctacaagagaggccgggacaaaccacctctt
actgacattggagttctatatgaagggaaggaacgcatcatttcaggctgcgaggtgatt
caagctactccttatggtcgttgtgctaatgttaacaacagttcagcttcttctcaacgt
atctttatcacatatcgaagggctcctccaatacgacctcagaattcattggcagtaacg
gatatctgtgttattgttaccagcaaaggagaaacccctcctcatacattctgcaaagtt
gataagaatttaaattgtgggatgtggggttccagtgtgtacctttgttacaagaagtct
gtgccagcttctaactctttagcctataaagctggcttaattttcagatatcctcaagag
aattatgagtcattccccctgtcggaatctgtacctctcttctgccttcctatgggagct
actattgagtgctgggaccctcaaaccaaatatccactaccggtgttctcaacatttgta
ctgacctgctcttctgcagaaaaggtttacggtgctgctattcagttttatgagccttat
ccccgggagttgctaacagaaaaacaacaattgcagctgggtctcctgacagctgtagag
agaaaagtggttacttccaagtccatcaattccaacaaatgcatctgccttctctcacac
tggcctttctttgaagcatttcgaaaatttcttatgttcatttacaaactctctgtctct
gggcctcatcctcttcccattgagaaacacatatcccattttatgcacaatatacctttt
ccgtcaccacaaaggccaagaattcttgtgcagctttctgcccatgatgcattaatattg
tctcagccagtttctacgccattgccattaagtggagcaaactttagcactctgctcatg
aatcttggaccggaaaactgtgccactctgttactctttgtattactagaaggcaagatc
ctgctccattctcttagaccagctgtgttgacaggagttgctgaagctgtagtagctatg
atatttccatttcagtggcaatgtccatatatccccctctgtcctttgtctctggccacc
gtactcagtgcacctcttccatttattgttggagttgattcacgatactttgatctgtac
gatccaccacaagatattgtgtgcattgatttagacacaaacatggtgtacatatcagat
gataagaagagcaccaactggaagcagtttcctaagaagccatgtaaaagtctgctcagc
accttaaagaagctacacccacagctggcagcagttcataggaaaactcaagaaggctct
gcagttgagatgactcctattgaggcagacttctcctggcagaagaagatgacagaactt
gagatggagatccaggaagcttttctccgtttcatggcatctattttaaagggttacaga
acattcctcaagccaatcacgcaggcgccttcaaataaagcaactgctgctgattccttg
tttgatcatcaaggatttttaaaaagcagagaccgtgcctatacgaaattctacacgcat
ctcaccaaaacgcagatattcagccgctttattgaagagtgcagttttgtgagtgacaag
gatactggcttggcatttttcgatgactgcatagaaaagctctttccggataaaggaaca
gaaaaaggagagaaggttgatgtagattccgttgaagatgcacggctgattgagcttgat
gagtcacaaaaaagcgaacatacagtgttcataatgccaccagaacctcctgctgatgac
ggacaggaccgagtgccaaaatacagctataaaaacttcccacgactagatttcaagctc
tttgacagaccacaggagctcaagctctccttcagcagacacccagctggaagcagcatt
tcaaatagtccggcgctcatggcaaagaggacaaaacaggagataaaaacagcccataaa
ttagccaagaagtgttacgtaagccccccccagtgggctaagtgtctcttcagtcatagt
tacagcctatggtttatttgtctgccagcctacatcagagttgcacatcccaaagtcaaa
gcactgcagcaggcatatgatgttctcattaaaatgaggaaaactgatgtggaaccactg
gatgaggtctgctacagagttgtaatgcagctctgtggactgtggggtcagcctgttcag
gccgtgagagtcctctttgagatgaaaaatgctggaatacagccaaatgccatcacctat
ggttattacaataaggcggttttagagtctccttggcctagcagtaaccgtagtggcata
ttcctgtggacaaaggtacgaaatgtagttcgtggcacagcacaatttaggcagtgctta
aagaaatcaacgcagagcccacgagtacctgtgatatcagctctgcggagtgccacgggt
ggaagtgatggggacatggtgagccatggtagcgtggatagttctaatgatgctaacagt
ggggagcacactctcttcgtcagtgacttagtcaggcttgattccattgataatcactct
agcacaggtggtcagtcagaccagggctacggatccaaggatgaacttttaagagatgat
ggggatagccttcatgtgactgacatacaagtagagaaagatatttcttctacagctgaa
gacctaataggagaggtttgtactgagaaatctgatgaaaagcaacagctgaatatagaa
acccatagtccaacagaaccacctgcttggggtaacagtattgtgaaagttccatctggc
atttttgatagcagtggaaggaagagctgtggtgaaactggttctagcccactgttcata
actcaggattcagttgaagatgtagtctttggtgatgtttctcctaagaaaacaagtgaa
aaaggacagaagaggcagaaactgttttcagagagaagctgcagtttcagcagtgaaagc
agagcgggaatgctgctgaaaaaaggcagcttggacttgcattctaaagaaatagcgata
atgatgggagcagatgccaagatcctaacagcagctttttctggggccaaaacttcaccc
tgtcatatgaataaatcccacagctttgaacgtatcattgaccagcaggtttctggcata
agtggcacttggagttgtgtgactgagagtgattgggaattggaacataggtcttcacca
gtgctggaagaacctggggaagggcaggagcatcttgagaatggaagagatgaaaacatg
accacagtggaagatgtgaaccttgaacagtcagccgagtccaaaaaccagaaaacagaa
tccaaagatgcaactactaaaaggaatagcttttatggggtagttaagcctattgaaagg
gaagatgttgaagtaggcttggacccattatctttgctggctactgacagcacacaaccg
aggcatccagaacctgaggaaaagttggtatcaccagttgcagcacgtaatttggcagat
gaaatagagagctacatgaatctgaagaatcccttgggtagtaactttcccagcatggaa
ctgcacaagccagagagggaagcagaagcctctggtacacttggtcactcccaagaaagg
aggtcaagcctacctttggatcccatcctgccatctcccaagtcttgtgaaaatcgtaga
agtccttctgtctccagatccaaaacattcactggacgaccaaagcaacaaacccatcca
cgagttcaaaaggagcggtcttcatctttgacaggactgggtcgttcttctccacatggc
tcgttaggatctgtcgtaacaactttatccaatctgaagttagacaatatactgtctgga
ccaaaaatggatgttctgaaatcaggcatgaagcaggctgccaatgtggccagtaagatg
tggggagttgtaacttcagcgtatagttactcagatgatgaggaagaaaacaatcgacca
gacttcaacttccctgctggttttgaagatagtattttaggagataatctgtcatcaaga
actggagtcccagggctaatgacgaacgagcttgcacagagcactactagtcttggcagt
agcagtagcagtggagatgcaggaagacaacattacagtgcaggtgaagtttcattccca
agaagtatgaaagttctagattctgagaagtcggagcacagctcttcacataatactagc
ttatccagcattttccagaactatgcaatggaggtgttgatgtcaagctgctctcaatgt
agggcttgtggtgctttggtttatgatgaagaaattatggctggatggacagcagatgat
tcaaacttgaacactacctgtcctttctgtaaaagtaccttcctacctttacttaatgtt
gaattcaaagatctgcgtggctctgcaagctttttcctgaagcaaagtacttcaggagat
agtttacagagtggtacccttccattaaccacggatccactggagcagaaactgttatcc
agtccagctgttgctgacttgatcagtttttccgatcacccacagtccagccacgccata
gctgaagaaacttgctctgcagctgagcagagtgatgcagcagaagaacagagtaaagat
accacgaccgtgaagacatctgccaataatccaccaaaaaggggagtatccttgactcgg
agccacagtgttggaggtccactgcaaaacattgacctttcacagagaccatctcatggc
atttcaacagttagtcttccaaatagtttgcaagaagttgtggatcctttaataaaaaga
cctaatccgctccctgtatccgtaccctacttgagctctttggtactgcgtaaggagctt
gaatcactgttggaaaatgagggagagcaagtaattcatacatccaaattcatcaatcaa
caccccataattttctggaacctagtttggtatttccaacggttggatctgcctagcaac
ttacctggactcattctaacatctgaacactgcaatgatggagtgcagcttcctttgaca
tcccttgctcaagatagcaagctagtatacatccatcttctgtgggacaatatcaacctc
caccaagagccaggggagcccctgtatatatcttggagaaatctcaattcttctgaaaag
agaccctccacagtggcagaagatcagcaggaaaccaacactttgttggagaacatcaaa
ctaagtattcaacacaatgacgttgttaaaccaatcaacctccttctacagaaagttaag
ccagatgtgaaacgacagaggagtttttatagagaaattcttttcctgtctctggtgtct
cttggaagagagaacattgacattgaggtctttgatagtgaatacagacttgcacataaa
aatctaccaaaggatgttcttgaaaagatgcagaaaatagatgctccaccaagcagcagg
gttgagtgctgtaggaagtgctttggagcacctttaatataa
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