Chroicocephalus ridibundus (black-headed gull): 134508945
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Entry
134508945 CDS
T10910
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
134508945 (TMC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crid02000
]
134508945 (TMC1)
03037 Cilium and associated proteins [BR:
crid03037
]
134508945 (TMC1)
Transporters [BR:
crid02000
]
Other transporters
Pores ion channels [TC:
1
]
134508945 (TMC1)
Cilium and associated proteins [BR:
crid03037
]
Other cilia and associated proteins
Stereociliary proteins
134508945 (TMC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Piezo_TM1-24
COX16
Na_K-ATPase
Motif
Other DBs
NCBI-GeneID:
134508945
NCBI-ProteinID:
XP_063177237
LinkDB
All DBs
Position
Z:complement(47815513..47882660)
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AA seq
950 aa
AA seq
DB search
MPKHEKPTTIEGDEGSDVDNEEGSAAENEENVKGTDKGGKRATPRTRRGHARGRARHGGE
EDEDDEDGTRRAGHRRHRNRRGRGRGAGNEGSDSEGDPSKARKNQADQKSKEDDEEEEDE
KGGKSGKGKNEKKQDKKPDKKGKKEKANKKKKDKKKSGSGSDSDSEEEPITEEELAKLKE
EVEEKKKLIATLRNKPWKMKKKLSVLKEAQLFVEKFEGALGKGKGKKFYAYKVMMTKKWM
KFQRDFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMILFGLTFGLVMVPE
ALMGKPYGSLPRKTVPRAEEASAMNFATLWDFSGFAQYSVLFYGYYNNQRTIGWLKFRMP
LSYFLVGVGTIGYSFMIVIRTMARNANEEGGGDDTSFNFSWKMFTSWDYLIGNPETADNK
FASITTSFKEAIVEEQESRKEENIHLTRFLRVLANFLALCTLAGSGYLIFFVVRRSQKFA
LEGLENYGWWERNEVNMVMSLLGMFCPTLFDVISSLENYHPRIALRWQLGRIFALFLGNL
YTFIIALMDEINLKLEEEKIVKYNMTIWEASLYNGTIPENSTAPPIQVDPADVPRGPCWE
TMVGQEFVRLTVSDTMTTYITILIGDFLRAVFVRFFNYCWCWDLEYGFPSYSEFDISGNV
LGLIFNQGMIWMGSFYAPCLPAINVFRLHTSMYLQCWAVMCCNVPQERVFKASRSNNFYM
AMLLFILFLSTLPAVYTIVSIPPSFDCGPFSGKTRMFEVISETLEHDFPSWFGKVFGYAS
NPGLILPFILLMVLSIYYLNATSKSYKEANLELKKKLQSQAEENKRRNKQKAQKSNEENP
FETEPPQPKQKEGKQEESTPNQDKKGQDGNEGKKTGQPQEASSSQALQHPGPAPNGHYPP
QGRGGSLPPPSIAVTRPPGPRGYGMPGYPPGNPHFPGAQPGMPRGPPNYR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacatgaaaagccaaccaccattgaaggagacgagggcagtgatgttgacaat
gaagaaggcagtgcagctgagaatgaagaaaatgtcaaaggaacagataaaggtgggaag
agagcaacaccgagaactagaaggggacatgccagagggagagccaggcatggtggtgag
gaggatgaggatgatgaagatgggacaaggagagctgggcatcgcaggcatagaaaccgt
agaggacggggacgaggagctggaaatgagggcagtgattctgagggagacccttcaaaa
gccaggaagaaccaggcagatcagaagtccaaggaagatgatgaagaagaggaagatgag
aaagggggtaaaagtgggaaaggcaaaaatgagaagaaacaggacaaaaagcctgataag
aaagggaaaaaagagaaggccaacaagaagaaaaaagacaaaaagaaatcaggatctggc
tctgattctgactctgaggaggagcccattacagaggaggaattggccaagctgaaagaa
gaggtagaagaaaaaaagaaactaattgccacgctacgaaacaagccgtggaagatgaaa
aagaagctgtctgtcctcaaggaagcccagctttttgtggagaagtttgaaggtgctctt
ggaaaaggaaaaggaaaaaaattctatgcatacaaagtgatgatgaccaagaaatggatg
aaatttcaaagggattttgagaattttaagacagcctgcataccctgggaaatgaaaatt
aaggagattgaaagtcactttggctcatcagtggcatcttatttcatatttttgcgctgg
atgtatgggataaacatgattctctttggactgacctttggacttgtaatggtgcctgag
gctttgatgggtaagccatatggctctttgcctagaaaaactgtcccaagagctgaagaa
gcaagtgctatgaactttgctactctatgggattttagtggctttgcacagtattctgta
ctcttttatggttattacaataaccagaggacaattggatggctcaaattcaggatgccg
ctttcgtatttccttgttggagttgggactattggctacagctttatgattgtcattcga
acaatggcaaggaatgcaaatgaagaaggtggtggggatgacactagttttaatttcagc
tggaagatgtttacaagctgggactacctgattggcaatcctgagacagcggataataag
tttgcctccatcacaacaagctttaaggaagctatcgtggaggagcaggagagccgaaaa
gaggaaaatattcacttgactcgattcctgagggttcttgctaacttcttagccttatgc
acgcttgctgggagtggctacctcatcttttttgttgtcagaagatcccagaaatttgcc
ctggaaggtctggagaactacgggtggtgggaaagaaatgaagtgaacatggttatgtca
cttttaggaatgttctgtccaactttatttgatgtaattagttctctggaaaactaccac
cctcgaatagctctaagatggcagctgggacgaatctttgctctttttcttggcaatctc
tacactttcattatcgccctaatggatgaaatcaatctcaagttggaagaagaaaagata
gtcaagtataacatgacaatatgggaagccagtctgtacaatggtactattccagaaaat
tcgactgctcctccaatacaggtggatcctgcagatgtccccagagggccatgctgggaa
acaatggtaggacaggaatttgtgcggctaacagtctctgacacaatgacaacttacatc
acgattctaattggtgatttcttgagagctgtctttgttaggtttttcaattactgctgg
tgctgggacttggagtatggatttccatcatattctgagttcgatataagtggaaatgtg
ctgggactgatctttaaccaaggcatgatctggatgggatctttttatgctccttgtctc
ccagcaatcaatgtattccgcctccacacttctatgtacctgcagtgctgggcagtgatg
tgttgcaatgtcccccaagagagggtcttcaaggcttccagatccaataacttctacatg
gccatgctgcttttcatcctctttctctccacactgcctgctgtgtacaccattgtttcc
atcccaccatcttttgactgtggtcctttcagtgggaagactagaatgtttgaagtcata
tcagaaactctggagcatgacttcccttcctggtttgggaaggtatttggttatgcctct
aaccctggactcatcctaccttttatattgctgatggtcctcagtatttattatctcaac
gctacatccaaatcctacaaggaagctaacttggaacttaaaaagaagctacagagtcaa
gcagaagaaaataaaagaagaaataaacaaaaggcacaaaaatcaaatgaggaaaatcca
tttgagacagaaccaccacagccaaagcaaaaagaaggcaagcaagaggaatccactcca
aaccaagacaagaaagggcaggatggcaatgaagggaagaagacaggccagccacaagaa
gccagctcctctcaggcactccaacatccaggtcctgccccaaatggccactatccccca
cagggtagaggaggaagccttcctcccccatccatagctgtgacgaggccaccagggccc
aggggctatggaatgccgggctatccgcctggaaatccacacttcccaggggcgcagcca
ggaatgcccaggggccctcccaactacagataa
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