Chroicocephalus ridibundus (black-headed gull): 134508959
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Entry
134508959 CDS
T10910
Symbol
PTPRD
Name
(RefSeq) receptor-type tyrosine-protein phosphatase delta isoform X1
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134508959 (PTPRD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crid01009
]
134508959 (PTPRD)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
crid04515
]
134508959 (PTPRD)
Enzymes [BR:
crid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
134508959 (PTPRD)
Protein phosphatases and associated proteins [BR:
crid01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
134508959 (PTPRD)
Cell adhesion molecules [BR:
crid04515
]
Immunoglobulin superfamily
Type II RPTP family
134508959 (PTPRD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
PTP-SAK
Tc-R-P
DSPc
V-set
Ig_C17orf99
PTPlike_phytase
Y_phosphatase3
PTP-NADK
Fn3_PTPRU
Glyco_hydro_46
Kre9_KNH
Motif
Other DBs
NCBI-GeneID:
134508959
NCBI-ProteinID:
XP_063177264
LinkDB
All DBs
Position
Z:53498392..54780169
Genome browser
AA seq
1962 aa
AA seq
DB search
MLVPSCRMMHIVRPMVVVLCLLLYADAETPPKFTRTPVDQTGVSGGVASFICQATGDPRP
KIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNSVGEISVSTRL
TVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNG
RIKQLRSGGTPIRGALQIELSEESDQGKYECVATNSAGTRYSAPANLYVRELREVRRVPP
RFSIPPTNHEIMPGGSVNITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELNDVRQ
SANYTCVAMSTLGVIEAIAQITVKALPKPPGTPVVTESTATSITLTWDSGNPEPVSYYII
QHKPKNSEEPYKEIDGVATTRYSVAGLSPYSEYEFRVVAVNNIGRGPPSEPVSTRTSEQA
PSSAPRNVQARMLSSTTILVQWEEPEEPNGQIQGYRVYYTMDPTQHVNSWMKHNVADSHI
TTIGNLVPQKTYSVKVLAFTSVGDGPLSSDIQVITQTGVPGQPLNFKAEPESETSILLSW
TPPRSDTISSYELVYKDGEHGEEQRVSTEPTTSYRLQGLRPNSLYLFRLAARSPQGLGAS
TAEISARTMQSKPSAPPQDISCTSPSSTSILVSWKPPPVEKQNGIITEYSIKYIGIDGED
VKPHEILGISSDSTQYLLEQLEKWTEYRISVTAHTDVGPGPESLAVLIRTDEDVPSGPPR
KVEVEAVNSTAVKVSWRSPVPNKQHGQIRGYQVHYVRMENGEPKGQPTLKDIMLADAQWE
YDDTTEHEMIISGLQPETTYSFTVTAYTTKGDGARSKPKLVSTTGAVPGKPRLVISHTQM
NTALIQWHPPVDTFGPLQGYRLKFGRKDVDTFTTMEFSEKEDHFTATDIHKGASYVFRLS
ARNKVGFGEEMVKEISVPEEVPSGFPQNLHSESSTSTSVQLTWQMPLLAERNGIITKYTI
LYRDINVAYQPVELPVVPADTTMTLSGLKPDTTYDVKVRAHTSKGPGPYSPSVQFRTLPV
DQAVFAKNFHVKAVMKTSVLLSWEIPENYNSALPFKILYDDGKMVVEVDGRATQKLITNL
KPETSYSFVLTNRGNSAGGLQHRVTAKTAPDVLRTKPVFIGKTNLDGMITVELPEVPSNE
NIKGYYIVIVPLKRSRGKFIKPWESPDEMELDELLKEIARKRRSIRLGREVELRPYIAAH
FEVLPTEFTLGDKKHYGGFENKQLQSGQEYVFFVLAVMEHSESTMYATSPYSDPVVSMDL
DPQPITDEEEGLIWVVGPVLAVVFIICIVIAILLYKSSKPDRKRAESDSRKSSIPNSKEV
PSHHPTDPVELRRLNFQTPALSSNSVPYASLIGSVSSLSSQTTTQSLYDNNSLPRFARKG
MASHPPIPILELADHIERLKANDNLKFSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVI
AYDHSRVLLSAIEGIPGSDYINANYIDGYRKQNAYIATQGALPETFGDFWRMMWEQRGAT
VVMMTKLEERSRVKCDQYWPSRGTETYGLIQVTLLDTVELATYCVRTFALYKNGSSEKRE
VRQFQFTAWPDHGVPEHPTPFLAFLRRVKTCNPPDAGPMVVHCSAGVGRTGCFIVIDAML
ERIKHEKTVDIYGHVTLMRAQRNYMVQTEDQYIFIHDALLEAVTCGNTEVPARNLYAYIQ
KLTQIETGENVTGMELEFKRLASSKAHTSRFISANLPCNKFKNRLVNIMPYESTRVCLQP
IRGVEGSDYINASFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMG
REKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPE
QGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVV
DIFQTVKMLRTQRPAMVQTEDQYQFCYRAALEYLGSFDHYAT
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgccaagctgtcggatgatgcacattgtcaggccaatggtggtagtcctgtgc
ttgctactctatgctgatgccgaaacaccaccaaagtttacaagaactcccgttgaccag
acaggggtttctggaggagtcgcctcattcatctgtcaagccacaggagatccaagacct
aaaattgtctggaacaaaaagggaaagaaagtcagcaatcagagatttgaggtaatagag
tttgatgatggatctggatcagttctcagaatacaaccactgcgcacgccacgagatgaa
gctatttatgaatgtgtggcttccaacagtgttggcgaaataagtgtgtccacaagactc
actgttctacgtgaggatcaaattccccgtggtttccccaccattgatatgggcccacag
ctgaaggtggttgaacgaactcgtacagctaccatgctatgtgcagccagtggcaatccc
gatcctgaaataacttggttcaaagatttcttacctgttgacacaagcaacaacaatggc
cgcatcaagcagttacgctcaggtggtacaccaataagaggtgccctccaaattgaactg
agtgaagaatctgaccaaggcaaatatgagtgtgttgcaaccaacagtgcgggtacacgc
tattctgcccctgctaatctatatgtcagagagctgcgagaagttcgacgggtcccaccg
aggttctctatccccccgaccaatcatgagatcatgcctggcgggagtgtaaatatcacg
tgtgttgcagtggggtcaccaatgccgtatgtgaaatggatgctaggagcagaagatttg
acacctgaggatgatatgccaatagggaggaacgtccttgagcttaatgatgtcaggcag
tctgcaaactatacatgtgttgctatgtctacccttggtgttatagaagcaatagcacag
ataactgtcaaagccttacccaaacctcctggaacacctgtggtgacagaaagcacggca
acaagcataacattgacttgggattctggaaaccctgagccagtttcttactacatcatc
caacacaaacccaaaaactctgaggagccatataaagaaattgatggcgtggccacaaca
cgctatagtgtggctggcctaagcccatattcagagtatgagtttcgggtagttgctgta
aataacatcgggcgagggccacccagtgagccggtgtcaacgaggacttcagaacaagca
ccttcaagtgcaccacgcaatgtgcaggcccgtatgttgagctctaccaccattttggta
cagtgggaagaacctgaggaacctaatggacaaatacaaggttacagagtttattacacc
atggaccccactcaacatgtcaacagttggatgaagcacaatgtggctgacagccatatt
accactattgggaatctggtaccccagaaaacgtactctgtgaaggttcttgcttttact
tctgttggggatggaccactttctagtgacattcaagtcatcactcaaacaggagtgcct
ggtcagccattgaacttcaaagcagaacctgagtctgaaacgagcatactactttcctgg
acacctccacgctctgatactatttccagctatgaactagtttacaaagatggggagcac
ggggaggagcaacgggtttccactgaacctactacatcctatcgcctgcaaggcttaagg
ccaaacagcttgtacttattccgtctagctgcacgttctccacagggcctgggtgcttcg
acagcagaaatctcagcgagaaccatgcagtcaaagccatcagctcctcctcaagacatt
agttgcacaagccccagctccactagcattttggtaagttggaaacctccaccggtggaa
aaacagaacggcattatcactgaatactccatcaagtacattgggattgatggagaagat
gtcaagccccatgaaattttgggaatttcctcggacagtacccaataccttttggaacag
ctggaaaaatggactgagtaccggatctctgtgactgcccacactgatgttggacctggc
ccagagagcttagcagtattgattcggacagatgaagatgttcctagtggtcctcctcgc
aaagtcgaggtagaggctgtcaactctactgctgttaaagtgtcatggcgctcacctgta
cccaataagcagcacggtcagatccgaggataccaggtccactacgtgaggatggaaaat
ggagagccaaagggtcagcccacgttgaaggacatcatgctggctgatgcacagtgggaa
tatgatgatactactgaacatgaaatgataatttctggccttcagcctgaaactacatac
tccttcactgtgacagcctatacaacaaaaggtgatggagcacgcagcaagcctaaactt
gtatctactaccggtgcagttccaggcaaacctcgacttgtgattagccacacacagatg
aacacggctctaattcagtggcaccctcctgtggacacttttggcccgctgcagggttat
cggctgaagtttggtcgcaaagacgtggatacatttacgaccatggagttctcagagaag
gaagatcacttcacagccacagatattcacaaaggagcttcttacgtcttcaggctctca
gctagaaataaagtgggctttggggaggagatggttaaagagatttctgttcctgaagag
gttcccagtggatttccccaaaatctccattcggaaagctctacttctacatcagttcaa
ttaacttggcagatgccactcttggcagaaagaaatggcattatcaccaaatataccatc
ttgtacagagatatcaatgttgcttaccagccagttgaactccctgttgttcctgctgat
accactatgacactttctggcttaaaaccagataccacatatgatgtaaaagtacgtgcc
cacacaagcaaagggcctggtccatatagtccaagtgtccagttcaggacactacccgtg
gatcaagcagtgtttgcaaaaaattttcatgttaaagcagtaatgaagacatctgttttg
ctgtcctgggaaattccagaaaattacaattcagccttgcctttcaaaatcctttatgat
gatgggaaaatggtcgtggaggttgatggacgtgctacacaaaagctgatcactaacttg
aagccagagacatcatattcatttgtgctgacgaacagagggaatagtgctgggggtctt
cagcacagagtgacagcaaagactgcaccagacgtgcttcgcaccaagccagtcttcatt
ggaaagaccaacttagacggcatgataactgtggaacttccagaagtaccttcaaatgag
aatataaaaggttattacatagttattgtgcctttgaagaggtctcgtggaaagtttatc
aaaccatgggagagtccagatgaaatggaactagatgagctgcttaaggagatagctagg
aaacgcagaagcattcgtcttggaagggaagttgaattaaggccatatattgcagctcac
tttgaagttcttcctacggagttcacgttgggtgataagaagcattatggtggctttgag
aataagcaactgcagagtggtcaagaatatgtcttctttgtgttggctgtaatggagcac
tcagaatctaccatgtatgcaaccagcccatattctgaccctgttgtgtcgatggatctt
gatccccaaccaattacagatgaggaagaaggcttgatctgggttgttggaccagttctt
gcagtggtgtttatcatctgtattgttattgccatacttctttataaaagcagtaaacct
gacaggaagagggctgaatctgattctagaaagagcagcatacccaacagcaaggaggtc
ccatctcaccatcccacagacccagtggagctgcgacgtcttaattttcaaactccagct
ttgagcagtaattcagtcccctacgcctccctgattggctctgtgtcctccctctctagc
caaactaccactcagtccttatatgataataactctctcccacgattcgctcgaaaaggt
atggccagtcatcccccaatacctatcttggaacttgcagatcacattgaaagattgaaa
gcaaatgacaatttgaagttctcacaggagtatgagtctattgatcctggccagcagttc
acatgggaacactctaatctcgaagtaaacaaaccaaagaatagatatgcgaatgtaatt
gcatatgaccattctcgtgttctactctcagcaatagaaggcataccgggcagtgactat
atcaatgccaactacatagatggatacagaaagcagaatgcttatatagcaacgcaaggg
gcattgccagaaaccttcggtgacttctggagaatgatgtgggagcaacggggtgcaaca
gtcgtcatgatgacaaaactagaggagaggtccagggtgaaatgtgatcagtactggcca
agtagaggcacagaaacttacggactaatccaagtgacccttttagacactgttgaattg
gcaacatactgtgttcgtacatttgcactttacaagaatggttcaagtgagaaaagggaa
gtgaggcaattccagttcactgcctggcctgaccatggcgtcccagaacacccaacacca
ttcttagctttcctgcgacgagtcaagacctgcaacccacctgatgctggacctatggtt
gttcattgcagtgctggagtcggcaggactggctgtttcattgtgatagatgccatgtta
gagagaataaagcatgaaaagactgtagatatttatggccacgtaactctaatgagagcg
cagaggaattacatggttcaaactgaggaccaatacatctttatccacgatgcactgctg
gaagcagtgacatgtggaaataccgaagtgccagccagaaacctgtatgcatatatccag
aagctgacacagatagaaacaggcgagaatgtcacaggaatggaactggaatttaagcgt
cttgctagctctaaggctcacacttcaagattcatcagtgccaatcttccatgtaataaa
ttcaaaaatcgccttgtcaatattatgccatatgagtctacaagggtatgcttgcagcca
atccgaggagtagaaggctctgattatatcaatgccagtttcattgatggatacagacaa
caaaaagcttacatagctacacagggtcctttagcagaaacaactgaagacttctggaga
atgctctgggagcacaattctacaattgtggtcatgctcactaagctacgagaaatgggc
agagaaaaatgccaccagtactggcctgcagagcgctcagccagataccagtattttgta
gtagatccaatggcagaatacaacatgccacagtatattctgagggaattcaaggttaca
gatgcaagggatggccagtcccgaacagtgaggcagttccagttcactgactggccagaa
caaggagtgccaaagtctggagaaggatttattgacttcataggccaagtgcataaaaca
aaagagcagtttggtcaggatggaccaatttctgttcattgcagtgcgggtgttggaagg
actggagtattcataactctgagcattgtgttagaaagaatgagatatgaaggtgttgta
gatatcttccagactgtcaaaatgttaaggacgcagcggccagccatggtacagacagag
gatcaataccaattctgctatcgagccgcactggaatatctgggcagttttgatcactat
gcaacataa
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integrated database retrieval system
