Chroicocephalus ridibundus (black-headed gull): 134508974
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Entry
134508974 CDS
T10910
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
crid Chroicocephalus ridibundus (black-headed gull)
Pathway
crid03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crid00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134508974 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crid03021
]
134508974 (SMARCA2)
03036 Chromosome and associated proteins [BR:
crid03036
]
134508974 (SMARCA2)
Transcription machinery [BR:
crid03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
134508974 (SMARCA2)
Chromosome and associated proteins [BR:
crid03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
134508974 (SMARCA2)
Chromatin remodeling factors
BAF complex
134508974 (SMARCA2)
PBAF complex
134508974 (SMARCA2)
GBAF(ncBAF) complex
134508974 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
134508974
NCBI-ProteinID:
XP_063177334
LinkDB
All DBs
Position
Z:complement(57112395..57230454)
Genome browser
AA seq
1568 aa
AA seq
DB search
MSTPTEPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GATDYQQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYIS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIPGDPQVMNQPNRGPSPFSPVQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHTMSGAAAGP
GPAPGMPGHTAAITPKTWTEGQAPDLSVSNAQQKLPAPPPSGRPSPAPPAAQPTAAMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDEEESSRLEADEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDVEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEED
EEEEESESESKSVKVKIKLNKKDEKTREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagagcctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctaggacctagcccaggaccagggccatctcctggctcagtt
cacagcatgatggggccaagtcctggtccgcccagtgtcccgcatccaatgccgacaatg
ggggctactgattatcaacaagaaggcatgcaccaaatgcataagtctattgatggcttg
cacgaaaaaggaatggttgaagatgttcattgtggctccatgaagagtatgcgacctcct
caccctggaatgggcccacctcagagtccaatggaccagcatagccaaggttatatatct
ccacacccatctccactcggagcaccagagcatgtgtccagtccaatgtctggaggaggt
ccaactccaccccagatgactcccagccagccaggacccattattccaggagacccacaa
gttatgaatcaacctaacagaggtccttccccttttagccctgtgcagctgcatcagctg
cgggctcagattctagcatacaaaatgctagctagaggtcagcctttaccagaaaatctc
cagcttgctgttcagggcaagagaaccctacctggcattcaacagcagcagcctcccagt
gccttcaacagacagtctggtattgggttacatacaatgagtggtgctgcagctggacca
gggcctgctccagggatgcctggacatacagctgccattacccctaaaacttggactgaa
ggccaagccccagatctgagtgtctccaatgcgcagcaaaagcttcccgcgccaccccct
agtgggaggccttctcctgccccccctgctgcccagcctaccgccgccatgcctgggcct
tctgtaccacagccaccacctggacagccttcacccattgttcagctgcagcaaaagcag
aatcgcatcagccctatccagaagccacaaggattggatcctgttgaaatactccaagaa
cgtgaatataggcttcaggctcgaattgctcacagaatccaggaactggagaacttgcct
ggttctctgccccctgatctgcgaaccaaagctacagtggagctgaaggcacttaggtta
ctgaatttccagcgccagctgagacaagaggtagtagcctgcatgcgtcgtgatacaacg
ctggagacagcactgaactccaaagcctacaaacgaagcaagcggcagactttgagggag
gcccgtatgacagaaaagcttgagaaacagcagaagatagaacaggagaggaagcgtagg
cagaagcatcaggaatacctgaatagcatattgcagcatgctaaagattttaaagagtac
caccggtcagttgctgggaaaattcagaagctttctaaagctgtagcaacttggcatgcc
aacactgagcgtgagcagaaaaaagaaactgagagaattgagaaagaaagaatgaggaga
ctaatggctgaagatgaagaaggctaccgtaagctgattgaccaaaagaaagatagacga
ctggcctacctattgcagcagacagacgaatatgtggctaacttgactaacctggtatgg
gagcacaaacaggcacaagcagccaaagagaagaagaagagaaggagaagaaagaagaag
gctgaagaaaatgcagaaggaatggcatctggtcttggtcctgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacacagaaacaggcaaagtt
cttcttggaccagaagcaccaaaagcaagtcagctggatgcttggctagaaatgaacccc
ggctatgaagttgctcccaggtcagacagtgaagatgaaagtggctctgaatatgaggag
gaggatgatgaagaagaatcaagcaggttagaagcggatgagaagatactcctggatcct
aacagtgaggaagtttctgagaaagatgcaaagcaaatcattgagacagccaaacaagat
gtggatgatgaatatagcatgcagtatagtgctagagggtctcagtcctactacacagtt
gctcacgcaatcacagaaagggtggaaaagcagtcttctcttcttattaatggcacacta
aaacattatcagctccagggactggaatggatggtttcactgtataataacaatctgaat
ggaattttagctgatgaaatgggactaggaaagacaatacagaccattgcactcatcact
tacctgatggagcacaaaagactcaatggcccctatctcatcattgttcccctttcgact
ttatccaattggacgtatgaatttgacaaatgggctccttctgtggtgaagatatcttac
aagggtacacctgcgatgcgccgctcactcgttcctcagcttcgaagtggaaaatttaat
gttcttttaactacctatgaatacataataaaggacaaacatatccttgctaagattcga
tggaaatacatgatagtagatgaaggccatcgaatgaagaaccatcactgcaagctgact
caggtcttgaatactcactatgtggcccctagacgaatactgctgactgggactccattg
cagaacaaactgcctgaactttgggctcttctcaatttccttctcccaaccattttcaag
agctgtagcacctttgaacagtggttcaacgctccatttgccatgactggagaaagggtt
gacttaaatgaggaagaaactattctgatcatccgtcgtctccataaagtgctccgaccc
ttcttgctgagaagattgaagaaagaggttgagtctcagctgccagaaaaggtggaatat
gtgatcaaatgtgatatgtcagctcttcagaagatcctgtatcgtcacatgcaagccaag
ggaatccttctcacagatggttctgaaaaagacaagaagggaaaaggcggggcaaaaact
cttatgaatactatcatgcaattgagaaagatatgcaatcacccatacatgtttcagcac
attgaggagtccttcgctgaacatttaggctactcaaatggtgtcatcaacggagccgaa
ctttatcgggcctcagggaagtttgagctactcgatcgtattctaccaaagttacgagct
actaaccatcgtgtgcttcttttctgtcaaatgacgtcactcatgaccattatggaagac
tactttgcctttagaaatttcctttacctgcgtctcgatggcacaacaaaatcagaggat
cgagctgctctgctgaagaagttcaatgagccagggtcacaatactttatcttcttgctg
agtacaagggctggagggctaggcttaaatctccaggctgctgacactgttataatcttt
gatagtgactggaatcctcatcaggatttgcaggcccaagatagagctcaccgaattggt
cagcagaatgaagttcgagtcctgcgactgtgcactgtgaacagtgtggaagagaagata
cttgctgctgcaaagtataagctgaatgtagatcagaaagttattcaggctggaatgttt
gatcagaaatcttcaagccatgaacggagagcattcctacaggctatactggagcatgaa
gaagaaaatgaggaggaagatgaagttcctgatgatgagactctgaatcagatgattgct
cgacgtgaggaggaatttgatctcttcatgcgcatggacatggatcgtcgcagggaggat
gccagaaaccccaagcgtaagccccgcttgatggaggaagatgaattaccatcctggatt
attaaggatgatgctgaagttgaaaggcttacatgtgaagaagaagaagagaaaatattt
ggaagaggatcccgtcaacgcagggatgtggactacagtgatgctctcacagagaaacaa
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaagtccggcttaaa
aaacggaagagacgaagaaatgtggataaagattctgggaaggaggatgtagagaaagca
aagaaaagaagaggcagacctcctgcagagaagttgtcacccaacccacccaaactgaca
aaacaaatgaatgctatcattgacactgtgataaactacaaggatagttcagggcggcag
ctaagtgaagtcttcattcagctcccatctagaaaagaattaccagagtattatgaattg
attagaaaaccggtggacttcaaaaagataaaggaaagaattcgcaaccataagtatcgg
agccttggagacttggagaaagatgtcatgttgctgtgtcacaacgctcagacattcaat
ctggagggatcacagatctatgaggattccattgttcttcagtctgtgttcaaaagcgca
cgacaaaagattgccaaagaagaagaaagtgaggatgaaagcaatgatgatgaagaagat
gaggaagaagaagaatcagaatcagaatcaaaatcagtgaaagtcaaaatcaagctaaat
aagaaggatgaaaaaactcgggagaaaggaaaaggcaagaagaggcaaagccgagcaaaa
gccaagcctgttgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
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integrated database retrieval system
